Query= MSMg01no180_m12.b1 MSMg01no180_m12.b1 CHROMAT_FILE:
MSMg01no180_m12.b1 PHD_FILE: MSMg01no180_m12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:54:06 2005
(598 letters)
>mm_chr2_69575569_69576566
Length = 998
Score = 1123 bits (581), Expect = 0.0
Identities = 591/595 (99%), Gaps = 3/595 (0%)
Strand = Plus / Plus
Query: 4 ggaattccttccttatcctggatcttggccgtaacgtgatggtttccccataagggtctt 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccttccttatcctggatcttggccgtaacgtgatggtttccccataagggtctt 263
Query: 64 cacaaaaatctgcatcgaggcggtggctccacccacgatggcagatcggaaaggagaatg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cacaaaaatctgcatcgaggcggtggctccacccacgatggcagatcggaaaggagaatg 323
Query: 124 aaattttcttaattatgagataaagtatttgacaaaatcaaattactttgatggatatat 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aaattttcttaattatgagataaagtatttgacaaaatcaaattactttgatggatatat 383
Query: 184 tattattattattattattattaattttcattttgcttagaaaatagatagatctggtat 243
|||||||||||||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct: 384 tattattattattattat--tt-attttcattttgcttagaaaatagatagatctggtat 440
Query: 244 ttctttgacttgtattcattgtgaattaattttctttaaaagtttaatatctcccaccct 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttctttgacttgtattcattgtgaattaattttctttaaaagtttaatatctcccaccct 500
Query: 304 ttagttactaaaagtatatatagtagatttttcagtgtttgtgtttgtatatcctctctg 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttagttactaaaagtatatatagtagatttttcagtgtttgtgtttgtatatcctctctg 560
Query: 364 ttttaatggccttaggttcagattaataattggattaatgagacaatataggtttctttc 423
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttttaatggtcttaggttcagattaataattggattaatgagacaatataggtttctttc 620
Query: 424 catacaaagttgactaaggtttaagaaaggagatacaggccgggcagtggtggcacatgc 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 catacaaagttgactaaggtttaagaaaggagatacaggccgggcagtggtggcacatgc 680
Query: 484 ctttaatcccaacacttgggaggcagaggcaggagggtttctgagtttaaggccagcctg 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ctttaatcccaacacttgggaggcagaggcaggagggtttctgagtttaaggccagcctg 740
Query: 544 gtctacagagtgagttccaggacagtcagggctacacagagaaaccctgtctagg 598
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gtctacagagtgagttccaggacagtcagggctacacagagaaaccctgtctagg 795
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 598
Length of database: 998
Length adjustment: 10
Effective length of query: 588
Effective length of database: 988
Effective search space: 580944
Effective search space used: 580944
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no180_m12.g1 MSMg01no180_m12.g1 CHROMAT_FILE:
MSMg01no180_m12.g1 PHD_FILE: MSMg01no180_m12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:54:07 2005
(151 letters)
>mm_chr2_69734534_69735084
Length = 551
Score = 273 bits (141), Expect = 4e-78
Identities = 147/149 (98%), Gaps = 2/149 (1%)
Strand = Plus / Minus
Query: 1 ctgctgttagtgaagctgcctcctaaatacttcccctgaatctcctaaaataa-tttttt 59
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 311 ctgctgttagtgaagctgcctcctaaatacttcccctgaatctcctaaaataaatttttt 252
Query: 60 ttaaggtaagattcttttcttttatttatttatttttttcctcttgatttgcttggtttg 119
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 251 ttaaggtaagattcttttcttttatttatttatttttt-cctcttgatttgcttggtttg 193
Query: 120 gttggtttggtttggtttttattttttga 148
|||||||||||||||||||||||||||||
Sbjct: 192 gttggtttggtttggtttttattttttga 164
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 151
Length of database: 551
Length adjustment: 8
Effective length of query: 143
Effective length of database: 543
Effective search space: 77649
Effective search space used: 77649
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
