Query= MSMg01no182_a09.b1 MSMg01no182_a09.b1 CHROMAT_FILE:
MSMg01no182_a09.b1 PHD_FILE: MSMg01no182_a09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:55:39 2005
(527 letters)
>mm_chr2_19647185_19648111
Length = 927
Score = 905 bits (468), Expect = 0.0
Identities = 510/528 (96%), Gaps = 8/528 (1%)
Strand = Plus / Minus
Query: 4 ggaattcactgtcagtcctaaaacagcacgtcctcagtgactggcgatgttcatcagacc 63
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 ggaattcactatcagtcctaaaacagcacgtcctcagtgactggcgatgttcatcagacc 668
Query: 64 atctcagcttcacagaggggaataaaagccccgggagagaagaaacactcttcattcttt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 atctcagcttcacagaggggaataaaagccccgggagagaagaaacactcttcattcttt 608
Query: 124 cagctattaagaagagaacattgtaaacctagtgagactgtagatgatttcagccctagc 183
|||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 cagccattaagaagagaaaattgtaaacctagtgagactgtagatgatttcagccctagc 548
Query: 184 ataaacctcagctgcctacatggcagtagccacttcaggcctctcagatctagagtagcc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 ataaacctcagctgcctacatggcagtagccacttcaggcctctcagatctagagtagcc 488
Query: 244 ttggggatgtcagaagaggggattcataaaaatcaagaccaccctcaggaattataaaag 303
||| ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||
Sbjct: 487 ttgtggatgtcagaagaggggattcttaaaaatcaagaccaccctcaggaatcataaaag 428
Query: 304 agggttacaggataagtccggggcaaagcttgctggtccagagtgcaccatcagctagag 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 agggttacaggataagtccggggcaaagcttgctggtccagagtgcaccatcagctagag 368
Query: 364 ataagtaaccccc----gaaaccgtaccccttccactgtcccagcccactgcacttaggt 419
|||||||| | ||||||||||||||| ||||||||||||||||||| |||||||
Sbjct: 367 ataagtaa----ctaatgaaaccgtaccccttacactgtcccagcccactgcgcttaggt 312
Query: 420 gggagacatatggaagtctgcagccagagaaagaaccacttttgagtggacctattttct 479
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 311 gggagacatatggaagtctgcagccagagaaagaacaacttttgagtggacctattttct 252
Query: 480 cagaatcctttagggattttgaggcccagacatcccatcatgtcttag 527
||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 cagaaccctttagggattttgaggcccagacatcccatcatgtcttag 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 527
Length of database: 927
Length adjustment: 10
Effective length of query: 517
Effective length of database: 917
Effective search space: 474089
Effective search space used: 474089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no182_a09.g1 MSMg01no182_a09.g1 CHROMAT_FILE:
MSMg01no182_a09.g1 PHD_FILE: MSMg01no182_a09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:55:39 2005
(334 letters)
>mm_chr2_19494577_19495310
Length = 734
Score = 638 bits (330), Expect = 0.0
Identities = 333/334 (99%)
Strand = Plus / Plus
Query: 1 cagtcttttcttttgggctgttaccatacacaagtctgtttactgcttaaaagccagtgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagtcttttcttttgggctgttaccatacacaagtctgtttactgcttaaaagccagtgc 260
Query: 61 tcacgactggagacatgatgggaagcaagttgagtttattggagggctggcaacctgaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcacgactggagacatgatgggaagcaagttgagtttattggagggctggcaacctgaaa 320
Query: 121 agttggggagggagatttttccactcagaagaccattttaggtaactcaggcatgaggaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agttggggagggagatttttccactcagaagaccattttaggtaactcaggcatgaggaa 380
Query: 181 gcacttttatagggaaagaggggaaatggacaggaagtgggtgctgatggaggtggtaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcacttttatagggaaagaggggaaatggacaggaagtgggtgctgatggaggtggtaac 440
Query: 241 tttatcatacagagtgtgtgtgtcctcttttatgttttcctttcctctgaccataacata 300
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 441 tttatcatacagagtgtgtgtgtcctcttttatggtttcctttcctctgaccataacata 500
Query: 301 ttgaccttgagttccaggctttaattcctgtgac 334
||||||||||||||||||||||||||||||||||
Sbjct: 501 ttgaccttgagttccaggctttaattcctgtgac 534
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 334
Length of database: 734
Length adjustment: 9
Effective length of query: 325
Effective length of database: 725
Effective search space: 235625
Effective search space used: 235625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
