Query= MSMg01no182_j13.b1 MSMg01no182_j13.b1 CHROMAT_FILE:
MSMg01no182_j13.b1 PHD_FILE: MSMg01no182_j13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:56:23 2005
(491 letters)
>mm_chr2_58268043_58268933
Length = 891
Score = 642 bits (332), Expect = 0.0
Identities = 350/356 (98%)
Strand = Plus / Minus
Query: 5 gaattctactacagcaccgagaagaccagcaaatgcattttatctcttcttttatttaat 64
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 gaattctactacagcaatgagaagaccagcaaatgcattttatctcttcttttatttaat 297
Query: 65 cattaattttaaggtacaatttaatctttagcataagtaccttacgcatttgttgacaac 124
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 cattaattttaaggtataatttaatctttagcataagtaccttacgcatttgttgacaac 237
Query: 125 attattttcaaacattttattatttactttaattttttttctaaattttatggcccaatg 184
|||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||
Sbjct: 236 attattttcaaacattttattatttactttaactttttttctaaatttcatggcccaatg 177
Query: 185 atttattataaatatatataaatacaactgattttaaaatatatttcttaagatctttct 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176 atttattataaatatatataaatacaactgattttaaaatatatttcttaagatctttct 117
Query: 245 aaattcacttacaatatatttataatgtaaaattttagtacatatatgactgttttatca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116 aaattcacttacaatatatttataatgtaaaattttagtacatatatgactgttttatca 57
Query: 305 tctgaaaataggacattcttgtctcttttctaatatatattttaaatttattttat 360
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56 tctgaaaagaggacattcttgtctcttttctaatatatattttaaatttattttat 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 491
Length of database: 891
Length adjustment: 10
Effective length of query: 481
Effective length of database: 881
Effective search space: 423761
Effective search space used: 423761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no182_j13.g1 MSMg01no182_j13.g1 CHROMAT_FILE:
MSMg01no182_j13.g1 PHD_FILE: MSMg01no182_j13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:56:23 2005
(285 letters)
>mm_chr2_58161487_58162170
Length = 684
Score = 513 bits (265), Expect = e-150
Identities = 280/285 (98%), Gaps = 1/285 (0%)
Strand = Plus / Plus
Query: 1 ctggaagggagctgtgcttctctagctgacagacccgttagaatatcaatgacacagaga 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 201 ctggaagggagctgtgcttctctagctgacagacccgttacaatatcaatgacacagaga 260
Query: 61 agtttagaagtcacaggtccgagtctaaagtcaatttactctgaaatatctttagagcca 120
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agtttggaagtcacaggtccgagtctaaagtcaatttactctgaaatatctttagagcca 320
Query: 121 atctttgcttccctctgtgggcagacctaacatcagggagctagcagataaagccgaact 180
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atctttgcttccctctgtgg-cagacctaacatcagggagctagcagataaagccgaact 379
Query: 181 gaacatcctgataaacagatttaaaaaaaaaaagctttagataatattcctcatcaatca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gaacatcctgataaacagatttaaaaaaaaaaagctttagataatattcctcatcaatca 439
Query: 241 aaggaccaatgatgccctttgaggtgagagctgtgctttcgtggt 285
|||||||| |||||||||||||||||||||||||||||| |||||
Sbjct: 440 aaggaccagtgatgccctttgaggtgagagctgtgcttttgtggt 484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 684
Length adjustment: 9
Effective length of query: 276
Effective length of database: 675
Effective search space: 186300
Effective search space used: 186300
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
