Query= MSMg01no182_n04.b1 MSMg01no182_n04.b1 CHROMAT_FILE:
MSMg01no182_n04.b1 PHD_FILE: MSMg01no182_n04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:56:40 2005
(336 letters)
>mm_chr2_81189071_81189805
Length = 735
Score = 611 bits (316), Expect = e-179
Identities = 331/336 (98%), Gaps = 1/336 (0%)
Strand = Plus / Minus
Query: 1 ttagtgaggctgcctttcctcacctaatgttgtctgtttcttagacacggtttgatgttc 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 535 ttagtgaggctgcctttcctcacctaatgttgtctgtttcttagaca-ggtttgatgttc 477
Query: 61 ctgatagctcccgtgcttggtaacctggtttcagctacaccagcaactgaacacagtatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 ctgatagctcccgtgcttggtaacctggtttcagctacaccagcaactgaacacagtatt 417
Query: 121 aaggtgcccagaacactaaatgaataaactctgttacgtgtctgaaattttacttaaaag 180
||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 416 aaggtgcccaggacactaaatgaataaactgtgttacgtgtctgaaattttacttaaaag 357
Query: 181 tgctaccaatatagatttgaaatatatgcaaatccaattgccataattcacagtatttgg 240
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 356 tgctaccaatatagatttgaaatatatgcaaatccaattgccataactcacagtatttgg 297
Query: 241 taacaggtaagctaattaaaaacaaccttcagtaatgaagccaatctattgaacaaaaac 300
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 296 taacaggtaagctaattaaaaacaaccttcagtaatgaagccaatctactgaacaaaaac 237
Query: 301 ctgtataacgcctctattacatggctgaattaaaaa 336
||||||||||||||||||||||||||||||||||||
Sbjct: 236 ctgtataacgcctctattacatggctgaattaaaaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 336
Length of database: 735
Length adjustment: 9
Effective length of query: 327
Effective length of database: 726
Effective search space: 237402
Effective search space used: 237402
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no182_n04.g1 MSMg01no182_n04.g1 CHROMAT_FILE:
MSMg01no182_n04.g1 PHD_FILE: MSMg01no182_n04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:56:40 2005
(315 letters)
>mm_chr2_81005452_81006166
Length = 715
Score = 588 bits (304), Expect = e-172
Identities = 310/312 (99%)
Strand = Plus / Plus
Query: 4 ggaattcacataaaaggagacagagtagaaagcatctatgatctcagcagtccaatgatg 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcacataaaaggagacagagtagaaagcatctatgatctcagcagtccaatgatg 263
Query: 64 agatgaaagatgcagacgtgaaaagttttggaatctcattggtctcagagactggagtac 123
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 agatgaaagatggagacgtgaaaagttttggaatctcattggtctcagagactggagtac 323
Query: 124 atatcagacaacaaagcaagactctgtctcaaataggtggaaaaccacaaccaaagtctt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 atatcagacaacaaagcaagactctgtctcaaataggtggaaaaccacaaccaaagtctt 383
Query: 184 atgctcctctaattcccacatgtgcatcatgacatgcatattgaatattcctgaacatat 243
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 atactcctctaattcccacatgtgcatcatgacatgcatattgaatattcctgaacatat 443
Query: 244 gctttgtctgtctgtacgtctgtctatctaactgtttatctgtctttgtgtctgtctctc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gctttgtctgtctgtacgtctgtctatctaactgtttatctgtctttgtgtctgtctctc 503
Query: 304 tgtctctctctt 315
||||||||||||
Sbjct: 504 tgtctctctctt 515
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 715
Length adjustment: 9
Effective length of query: 306
Effective length of database: 706
Effective search space: 216036
Effective search space used: 216036
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
