CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTTCAGGGTGTATTTCCAAAGAGAACTGATTATATTTTTAAATTAA
GGGTTTTTTTGTTTTTGTTTTCGTTTTTATTGCTAAAAATAATGGAAATT
TTCAAGTATACTCTTTTGGTTTCTTCAAAAAAAATTTAATGCTGTTCTGT
TGTGAGGTTATGGTGAAAAAATACAGTGTGCTGGCTGTGACCTCACCTGA
CCCAGGGAGCTTGCATTCTACACTGGGGGTGCAAGCAACTGAACACAAGT
TTCAAAAAAAGATAGCCTTCGCTCTCCTGAGGGCTTGTGAGGTGACCCAG
GGGTTTACAGCTTGAACTCAGGTAGCAGCTTATTTCACAGGCCATTTGAC
AGGGACAAGGGTTCACTTCTTTAGTATGTTGGCTGTAGCTCTTAATCACT
CTCATCATGGGAAGAACAACACATAAACCCAGACTATGGACTAACCAGCT
TGGACTTTTCAAAATGTCTAAATTGTAAAAAAACAAAGAATAGGATTTGT
TCTGGTGCTGTAGTTTGGATCATAAGTGATTTCCCAAAGTCTATGTGTTA
AATGCTTGGTTACAGTAGCACTTTTTTTTTTTTTTTAAGATTTTTTTATT
ATATGTAAGTACACTGTAGCTGTCTTCAGAAACTCCAGAATAAGTCGCCA
GATCTTGTTAN

GAATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXCAGGGCCAAAAAGGGGGAGTGGGTG
GGTAGGGGAGTGNTTTTTCCCCCCCTCTTTNTTTTTCTTTTTTTTCTTTC
CCCTTTTTCCCTTTCCCCCCTTCCTTTCCTCTCTCTCTTCCCCTTTATCT
CCCTTTCACTCAACCTCAACCCCATTTATCCATTCAACATACCCTCATCC
CTTTTTAACTTTATACACATCCTTAAACAAATACTATCTTTACCTTTTTA
CCTCCCCCCCCTTCCCCAATCCCCTTTTTTTTTTTTTTACCCCCCATTCC
CCACAATGAACACAACTATTTTTTTTTTTTCCCCCCCCCCCACCTTTTAT
CCCCAATTTCTCCTTTTTCTTTATTTCTTCCCCCCCCCAAAAAAAAAAAA
AACCACCCCCCCGGGCGATATCCCCATTTTCTATCCTTTTTCGGCCCCTA
TACGACCTATCATTCTACCCCCCGCATCCCAGATACATTTATTTGTTTTT
TTACACTTTTAAACAATACCACCTTCCTAAAAACCTCGACAAATGCTATC
GGATCTTCCACATTCATAAATACACACGAACATAATCACCGCTCAATATT
AATATATCCTTCACCTCCCATACCTAGATCCCATACTACACTTCCCTCCT
CTTAAACACGTGATACATCCGGATATAACGCCCCGCGGCCGCGCGATACG
ATAATATTATTTAACAGCATATTCAAAAACTATACCCCCCCTN

Query= MSMg01no183_b16.b1 MSMg01no183_b16.b1 CHROMAT_FILE:
MSMg01no183_b16.b1 PHD_FILE: MSMg01no183_b16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:57:02 2005
         (624 letters)



>mm_chr2_142850254_142851276
          Length = 1023

 Score =  806 bits (417), Expect = 0.0
 Identities = 553/631 (87%), Gaps = 58/631 (9%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcttcagggtgtatttccaaagagaactgattatatttttaaattaaggg-ttttt 63
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 240 gaattcttcagggtgtatttccaaagagaactgattatatttttaaattaagggtttttt 299

                                                                       
Query: 64  ttgtttttg--------ttttcgtttttattgctaaaaataatggaaattttcaagtata 115
           |||||||||        ||||| ||||||||||||||||||||||               
Sbjct: 300 ttgtttttgtttttgttttttcatttttattgctaaaaataatgg--------------- 344

                                                                       
Query: 116 ctcttttggtttcttcaaaaaaaatttaatgctgttctgttgtgaggttatggtgaaaaa 175
                               |||||         ||||||||||||||||||||| ||||
Sbjct: 345 --------------------aaaat---------ttctgttgtgaggttatggtg-aaaa 374

                                                                       
Query: 176 atacagtgtgctggctgtgacctcacctgacccagggagcttgcattctacactgggggt 235
           ||||| ||| |||||||||||||||||||||| ||||||||||||||||| |||||| ||
Sbjct: 375 atacaatgtactggctgtgacctcacctgacctagggagcttgcattctatactgggagt 434

                                                                       
Query: 236 gcaagcaactgaacacaagtttc-aaaaaaagatagccttcgctctcctgagggcttgtg 294
           ||||||| ||||||||||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct: 435 gcaagcacctgaacacaagtttcaaaaaaaagatagccttcactctcctgagggcttgtg 494

                                                                       
Query: 295 aggtgacccaggggtttacagcttgaactc-aggtagcagcttatttcacaggccatttg 353
           ||||||||||| |||||||||||||||||| || |||||| |||||| ||||||||||||
Sbjct: 495 aggtgacccagcggtttacagcttgaactccag-tagcagtttatttgacaggccatttg 553

                                                                       
Query: 354 acagggacaagggttcacttctttagtatgttggctgtagctcttaatcactctcatcat 413
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 acagggacaaaggttcacttctttagtatgttggctgtagctcttaatcactctcatcat 613

                                                                       
Query: 414 gggaagaacaacacataaacccagactatggactaaccagcttggacttttcaaaatgtc 473
           || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 ggaaagaacaacagataaacccagactatggactaaccagcttggacttttcaaaatgtc 673

                                                                       
Query: 474 taaattgtaaaaaaacaaagaataggatttgttctggtgctgtagtttggatcataagtg 533
           |||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 674 taaattgtaaaaaa-caaagaataggatttgttctggtgttatagtttggatcataagtg 732

                                                                       
Query: 534 atttcccaaagtctatgtgttaaatgcttggttacagtagcactttttttttttttttaa 593
           |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 733 atttcccaaagtctatgtgttaaatgcttggttacagtggcactctttttttttttttaa 792

                                          
Query: 594 gatttttttattatatgtaagtacactgtag 624
           ||||| |||||||||| ||||||||||||||
Sbjct: 793 gatttatttattatatataagtacactgtag 823


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 624
Length of database: 1023
Length adjustment: 10
Effective length of query: 614
Effective length of database: 1013
Effective search space:   621982
Effective search space used:   621982
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)