NNNAAAATTTTNNNNGGGCATCTATXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXCGCGGAATTCTCTGTAACACGTTAGAAATGGGATT
TGTAAAAATAAATGTTCAATATTTTTAAAGGGGTTCTATCAAGTTATGTT
TCCATAGCAGAATGAGAGATGCCTGCTGTTCTCCAAAGGGAAACTAACAG
TGGAAGATGATTTAACCTCTTCCAATTTGAGTAGACGTGTAGACTTTAGT
CTTCATTACTTTGATGGTGTATTAGTGAATAGAATTTCCATATGTAAGAG
GCAGTTATAGAAGTCAACAGATGCCCTTCCTCTCGACTCGAGCCCCGGGC
TACCTTGCCAGCAGAGTCTTGTTTTTTTCCCCCCCCCCCCCACACGGGAC
TCCCCACGGGATCCTAAGACCTCTGGTGACAGAAACACAACGCCTGCCCC
AATCCAATCGCGCGGAACCTAAGACTGCGGTACATAGGGAAGCAGGCTAC
CCGGGCTTGATCTGGGGCACAAACCCCTTCCGCTCAACTCAAGCCCCGGG
CTACCTTGCCAGCAGAGTCGCCTGACACCCGCAAGGGCCCACACAGGATT
CCACACGAGATCCTAAGACCTCTAGTGAGTGGAACACTACTTCTGCCAGG
AGTCTGGTTCGAACACCAGATATCTGGGTACCTGCCCTGTCAGAAGAGAG
TG

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXTCCTAGCTAGAGAACCAAAATAG
GTCACACTTCTTCTTCTAATAGAATTTGAATACACAGGGTCATATTTAAT
AAGGATGCAGTTCTATGTCATCTTAATTTTTGAAGATTGATGTCATCAAC
TACCAAACACTGATTGGCTTACTCCAGTGCAATTTTTCTCTCCCAGACTG
GAGGGTTGAAATCCATGACTGAAGTTCTTGTAGAGTCTTACTCTCTAGAA
AGAACATCAGGCTTCTCCCTAGCTTTCAGTGGCTGTCGATAATCCATTTC
TTAGTTCTTCATCATGCCCCCTCCACTCATTTTGTCTGAACATCTCTGCT
TTTTCTTTGTGTACCACTAACAATTATAGGATTATTTCCTCCTCTAATTT
GGTATGCTCATATTTTAACTTAGCACCTATCATCCTATTTCCAAATTTGA
TTTTATTTTGAGGTTTCATGTGGGCCTGGATTTTGTGAACTATTTAACCT
AGTTGATTGGCAATTGGTAAGATGACAGATATGTTTCTGTCATTTTAAAA
AATAAATAGTTGATAATTACCAGTAATCGAATGCCCGATGGTTTTTCATA
CTGAACCTTTGACCATTTTAAAGTTCCTGCCACGTCAGTGGTCCTGAACC
TACTATAAACTGTG

Query= MSMg01no184_o08.b1 MSMg01no184_o08.b1 CHROMAT_FILE:
MSMg01no184_o08.b1 PHD_FILE: MSMg01no184_o08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:59:27 2005
         (308 letters)



>mm_chr2_107567381_107568088
          Length = 708

 Score =  458 bits (237), Expect = e-133
 Identities = 249/253 (98%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctctgtaacacgttagaaatgggatttgtaaaaataaatgttcaatatttttaaa 64
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 457 gaattctctgtaacacgttaaaaatgggatttgtaaaaataaatgttcaatatttttaaa 398

                                                                       
Query: 65  ggggttctatcaagttatgtttccatagcagaatgagagatgcctgctgttctccaaagg 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 ggggttctatcaagttatgtttccatagcagaatgagagatgcctgctgttctccaaagg 338

                                                                       
Query: 125 gaaactaacagtggaagatgatttaacctcttccaatttgagtagacgtgtagactttag 184
           |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 337 gaaactgacagtggaagatgatttaacctcttccaatttgagtagatgtgtagactttag 278

                                                                       
Query: 185 tcttcattactttgatggtgtattagtgaatagaatttccatatgtaagaggcagttata 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 tcttcattactttgatggtgtattagtgaatagaatttccatatgtaagaggcagttata 218

                        
Query: 245 gaagtcaacagat 257
           |||| ||||||||
Sbjct: 217 gaaggcaacagat 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 308
Length of database: 708
Length adjustment: 9
Effective length of query: 299
Effective length of database: 699
Effective search space:   209001
Effective search space used:   209001
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no184_o08.g1 MSMg01no184_o08.g1 CHROMAT_FILE:
MSMg01no184_o08.g1 PHD_FILE: MSMg01no184_o08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:59:27 2005
         (282 letters)



>mm_chr2_107389138_107389819
          Length = 682

 Score =  534 bits (276), Expect = e-156
 Identities = 279/280 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   tcctagctagagaaccaaaataggtcacacttcttcttctaatagaatttgaatacacag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcctagctagagaaccaaaataggtcacacttcttcttctaatagaatttgaatacacag 260

                                                                       
Query: 61  ggtcatatttaataaggatgcagttctatgtcatcttaatttttgaagattgatgtcatc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 261 ggtcatatttaataaggatgcagttctatgtcatcttaatttttgaagattaatgtcatc 320

                                                                       
Query: 121 aactaccaaacactgattggcttactccagtgcaatttttctctcccagactggagggtt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aactaccaaacactgattggcttactccagtgcaatttttctctcccagactggagggtt 380

                                                                       
Query: 181 gaaatccatgactgaagttcttgtagagtcttactctctagaaagaacatcaggcttctc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaaatccatgactgaagttcttgtagagtcttactctctagaaagaacatcaggcttctc 440

                                                   
Query: 241 cctagctttcagtggctgtcgataatccatttcttagttc 280
           ||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cctagctttcagtggctgtcgataatccatttcttagttc 480


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 282
Length of database: 682
Length adjustment: 9
Effective length of query: 273
Effective length of database: 673
Effective search space:   183729
Effective search space used:   183729
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)