Query= MSMg01no185_d18.b1 MSMg01no185_d18.b1 CHROMAT_FILE:
MSMg01no185_d18.b1 PHD_FILE: MSMg01no185_d18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:59:52 2005
(233 letters)
>mm_chr2_13023579_13024207
Length = 629
Score = 414 bits (214), Expect = e-120
Identities = 223/228 (97%), Gaps = 4/228 (1%)
Strand = Plus / Plus
Query: 5 tgatccaatcaattgcatctcttagtatacgttgtatttaaaacagatgggagttattcc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 tgatccaatcaattgcatctcttagtatacgttgtatttaaaacagatgggagttattcc 264
Query: 65 tatgtatataatgcttagtatgaaaagctgactgaaatcctgtatcaccttccagtgggt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tatgtatataatgcttagtatgaaaagctgactgaaatcctgtatcaccttccagtgggt 324
Query: 125 tttttttttttttaaacaaaacaaaacaaaaatgattttcacacacaaccaagtgcttcg 184
||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 325 ttttttttt----aaacaaaacaaagcaaaaatgattttcacacacaaccaagtgcttcg 380
Query: 185 tagaagcctggccttgttgcctctgcaccttaggctttgcatttcttc 232
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tagaagcctggccttgttgcctctgcaccttaggctttgcatttcttc 428
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 233
Length of database: 629
Length adjustment: 9
Effective length of query: 224
Effective length of database: 620
Effective search space: 138880
Effective search space used: 138880
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no185_d18.g1 MSMg01no185_d18.g1 CHROMAT_FILE:
MSMg01no185_d18.g1 PHD_FILE: MSMg01no185_d18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:59:53 2005
(290 letters)
>mm_chr2_13200910_13201599
Length = 690
Score = 553 bits (286), Expect = e-162
Identities = 289/290 (99%)
Strand = Plus / Minus
Query: 1 aggaaatgaaatcacaggacaagtcagggccaaatctgtgtgtgtgcaggcagctggctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 aggaaatgaaatcacaggacaagtcagggccaaatctgtgtgtgtgcaggcagctggctc 431
Query: 61 tatccacaatgagcagcgggctgcacatgtgaccgtgtgtatgcacgtctcatggtatgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 tatccacaatgagcagcgggctgcacatgtgaccgtgtgtatgcacgtctcatggtatgt 371
Query: 121 gtctatgagaagctcagtccttcatggttcctatcatttggtggcagtcctgtgtcgtaa 180
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 gtctatgagaagctcaatccttcatggttcctatcatttggtggcagtcctgtgtcgtaa 311
Query: 181 ttgctacttcagggtgataaatgtcttcttgaatttttggtccactgttcattaaatagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 ttgctacttcagggtgataaatgtcttcttgaatttttggtccactgttcattaaatagc 251
Query: 241 agggaatttaagtcacatgaacacatttagatcgagaaaagagggatacc 290
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 agggaatttaagtcacatgaacacatttagatcgagaaaagagggatacc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 690
Length adjustment: 9
Effective length of query: 281
Effective length of database: 681
Effective search space: 191361
Effective search space used: 191361
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
