Query= MSMg01no185_h11.b1 MSMg01no185_h11.b1 CHROMAT_FILE:
MSMg01no185_h11.b1 PHD_FILE: MSMg01no185_h11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:00:10 2005
(605 letters)
>mm_chr2_147517858_147518861
Length = 1004
Score = 1013 bits (524), Expect = 0.0
Identities = 536/540 (99%), Gaps = 1/540 (0%)
Strand = Plus / Minus
Query: 66 ttaatgatacgtgcgcttttaagatttaaattacataaatcaagttgattatcagtacgg 125
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1004 ttaatgatacgtgtgcttttaagatttaaattacataaatcaagttgattatcagtacgg 945
Query: 126 ttgcctgagttgtcaatagcaaggcctatggtgtctctaacatgtcttactaatccaagt 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 944 ttgcctgagttgtcaatagcaaggcctatggtgtctctaacatgtcttactaatccaagt 885
Query: 186 actgattcaaaataaattaactgtattagtttgtcttgctctcaaggcttaaaagctatt 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 884 actgattcaaaataaattaactgtattagtttgtcttgctctcaaggcttaaaagctatt 825
Query: 246 ttttttattttatttttaaaggggatggaactgttgctgataactctggtggtcatttaa 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 824 ttttttattttatttttaaaggggatggaactgttgctgataactctggtggtcatttaa 765
Query: 306 tagtcaaggtgtattaaacactttaccatgagctaagtaatttcacctgataatccattt 365
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 764 tagtcaaggtgtattaaacactttagcatgagctaagtaatttcacctgataatccattt 705
Query: 366 atctgcccccccccaaagcaaaatgatttgaagcttacttatttaagggcaaacacattt 425
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 atctg-ccccccccaaagcaaaatgatttgaagcttacttatttaagggcaaacacattt 646
Query: 426 ctttaaaaaaaaaaaagtcatctctagtcaaggaatttcctttgaaattccccaactgct 485
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Sbjct: 645 ctttaaaaaaaaaaaagtcatctctagtcaaggaatttcctttgaaattccccaactgct 586
Query: 486 gatttttcaatcaatcattctattaaaataaatttgtcaattgaaatgaaaacagctctg 545
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Sbjct: 585 gatttttcaatcaatcattctattaaaataaatttgtcaattgaaatgaaaacagctctg 526
Query: 546 atgccctgaggcgaaatctcgtgtttgtttcatcatggacctgcagataccttttataaa 605
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 atgccctgaggtgaaatctcgtgtttgtttcatcatggacctgcagataccttttataaa 466
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 605
Length of database: 1004
Length adjustment: 10
Effective length of query: 595
Effective length of database: 994
Effective search space: 591430
Effective search space used: 591430
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no185_h11.g1 MSMg01no185_h11.g1 CHROMAT_FILE:
MSMg01no185_h11.g1 PHD_FILE: MSMg01no185_h11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:00:10 2005
(286 letters)
>mm_chr2_147387144_147387829
Length = 686
Score = 540 bits (279), Expect = e-158
Identities = 286/291 (98%), Gaps = 5/291 (1%)
Strand = Plus / Plus
Query: 1 atttctcaaagctcttctcttctcttctcttctcttctcttctcttctcttctcttctct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 atttctcaaagctcttctcttctcttctcttctcttctcttctcttctcttctcttctct 255
Query: 61 tctcttctcttctcttctcttctcttctcttctcttctcttctcttctcttctcttctct 120
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Sbjct: 256 tctcttctcttctcttctcttctcttctcttctcttctcttctcttctcttctcttctct 315
Query: 121 tctcttctct-----ctctctctctttctttcttttttttatgttcacacagtgcaaatg 175
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 tctcttctcttctctctctctctctttctttcttttttttatgttcacacagtgcaaatg 375
Query: 176 tcacatttacccttcacctccacctacttcttcacagacagaaacgcctagaatgtgggt 235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 tcacatttacccttcacctccacctacttcttcacagacagaaacgcctagaatgtgggt 435
Query: 236 gccccagcacgaaatctgcagggcactcatcagagggagagattcctcaga 286
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 gccccagcacgaaatctgcagggcactcatcagagggagagattcctcaga 486
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 141
Number of extensions: 38
Number of successful extensions: 38
Number of sequences better than 10.0: 1
Number of HSP's gapped: 35
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 686
Length adjustment: 9
Effective length of query: 277
Effective length of database: 677
Effective search space: 187529
Effective search space used: 187529
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
