CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTTTGTTTATCTCTGTATGCTATTTTTAATAGGGTTATTTGTTTCTC
TGGAGTTTAACTTCTTGAGTTCTTCATATATATTGGATATTAGCCCTGCA
TTGTATGTATGGCTGGTTAAGATCTTTTTCCAATCTTTTGGTTTTGTTTT
GTCCTATTAACAGGCNNNCTTTACCTTACAGGATCTTTGAAATTTTATAA
AGTTCCATTTGTCAATTCTTGGTCTTCGAGTGTAAAATATGGGTGTTTTT
TTCTGGAAAATTTCCCCTGATCCCATGTGTTCAAGGCTCTTTCCCCCTTT
ANTCCCATTTTTTTTTCCCCCTCCCCCCCCCTATGTGGATGTCCCTTGAT
CCCCTTTGTTCTTTGACCCCCCCCCAAAAAAAAAAAAANAAACCAACTTG
GGTGTCTTCCTACTTGCTTTTTCCCCACTTTGACCCGGCCCCCCCCTTGC
TTCCAACTGCCTCCCCTCTTTTCTCACTCCCTAGTTTTGGNNNCCCCCCT
CTACCTCCATATTTATATTTAATAAAATGTCCTAAAACACCTTGAATAAA
AAAGATATTCAAAAAAAAAAACAAAAAACCCAGGTCCCCTTTGCAACAAT
CCCGGTTCCCNCCTTTTCCCTTCCCCNCTATTCTCCCCCCCTATTCCTAC
AGATGGTTGTTCCCTCTTCTTCCTTTTCCCTTATTATACTATATATTATT
GTGGGTTGGG

NTTCTGGTCNNNNCCTCCATGATAXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGACTGGGG
CTTTGTAAAGTTCTATCCCACTCCATCATCAAGTAACTGGTATTCTAGGA
AGATCAAAAATAAAGAACCGGGCTTCAATAGCATGAATGTGGGTACTTTT
AGAAATAGAGCCCAGATTCCCAGTTCTCCAGACACCATAGGACACAATAG
TAATCTAATGTCTCTAAACAATGATTTTTGTTCTTATTCAAAACTGAGAG
TTTGGAAGAATAGTTATAGTAGGTGAATTTATATATATTTTCTGTCACAC
AAATGCCAGGATTATAAGTGTCAGTTTTCCTGATGGCCAAACAACACTTT
TCCTCATTGTCTGAAATCCATTCTCCTAATTACCCCTCTCAGTATGAGTA
ATTGGATATTTAGAAAAATTTACATGTAGTAGCTCCAAGCAAATCATCAC
ACATATTAAATACTAAAAATGCTACTAAAAAATCTACTTCATTATTTCTA
GCTGACTCGTTGAATCATTTCTTTCATTTTATTTTACTTTTTTTTCCCCC
CGCTATCATCCATTGCCGCAGACCCTTTTGGGTCCCTTTGTCTTCGAGGA
ACGGGTCTCTAGTCGCAGGTGGTCTAAGTGTTGGTGGATGTCAGACTGAC
CATCATTCGAGAATGTCGTAAATCTGACTGTCTTGGTACAN

Query= MSMg01no185_i08.g1 MSMg01no185_i08.g1 CHROMAT_FILE:
MSMg01no185_i08.g1 PHD_FILE: MSMg01no185_i08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:00:14 2005
         (558 letters)



>mm_chr2_53752825_53753782
          Length = 958

 Score =  982 bits (508), Expect = 0.0
 Identities = 549/576 (95%), Gaps = 22/576 (3%)
 Strand = Plus / Minus

                                                                       
Query: 1   tgactggggctttgtaaagttctatcccactccatcatcaagtaactggtattctaggaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 tgactggggctttgtaaagttctatcccactccatcatcaagtaactggtattctaggaa 590

                                                                       
Query: 61  gatcaaaaataaagaaccgggcttcaatagcatgaatgtgggtacttttagaaatagagc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 gatcaaaaataaagaaccgggcttcaatagcatgaatgtgggtacttttagaaatagagc 530

                                                                       
Query: 121 ccagattcccagttctccagacaccataggacacaatagtaatctaatgtctctaaacaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 ccagattcccagttctccagacaccataggacacaatagtaatctaatgtctctaaacaa 470

                                                                       
Query: 181 tgatttttgttcttattcaaaactgagagtttggaagaatagttatagtaggtgaattta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 tgatttttgttcttattcaaaactgagagtttggaagaatagttatagtaggtgaattta 410

                                                                       
Query: 241 tatatattttctgtcacacaaatgccaggattataagtgtcagttttcctgatggccaaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 tatatattttctgtcacacaaatgccaggattataagtgtcagttttcctgatggccaaa 350

                                                                       
Query: 301 caacacttttcctcattgtctgaaatccattctcctaattacccctctcagtatgagtaa 360
           || ||||||||||||||||||||||||||||||||||||||  ||| |||||||||||||
Sbjct: 349 caccacttttcctcattgtctgaaatccattctcctaattattcctttcagtatgagtaa 290

                                                                       
Query: 361 ttggatatttagaaaaatttacatgtagtagctccaagcaaatcatcacacatattaaat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 ttggatatttagaaaaatttacatgtagtagctccaagcaaatcatcacacatattaaat 230

                                                                       
Query: 421 actaaaaatgctactaaaaaatctac---------------------ttcattatttcta 459
           ||||||||||||||||||||||||||                     |||||||||||||
Sbjct: 229 actaaaaatgctactaaaaaatctacttctccaggtcctctctgtgtttcattatttcta 170

                                                                       
Query: 460 gctgactcgttgaatcatttctttcattttattttacttttttttccccccgctatcatc 519
           ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 169 gctgactcgttgaatcatttctttcattttattttactttttttt-cccccactatcatc 111

                                               
Query: 520 cattgccgcagacccttttgggtccctttgtcttcg 555
           ||||||||||||||||||||||||||||||||||||
Sbjct: 110 cattgccgcagacccttttgggtccctttgtcttcg 75


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 558
Length of database: 958
Length adjustment: 10
Effective length of query: 548
Effective length of database: 948
Effective search space:   519504
Effective search space used:   519504
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)