Query= MSMg01no189_d02.b1 MSMg01no189_d02.b1 CHROMAT_FILE:
MSMg01no189_d02.b1 PHD_FILE: MSMg01no189_d02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:05:06 2005
(336 letters)
>mm_chr2_32008735_32009466
Length = 732
Score = 532 bits (275), Expect = e-155
Identities = 302/313 (96%), Gaps = 4/313 (1%)
Strand = Plus / Plus
Query: 24 gctcgctgctcgtgtggggcctgctctggtcctccccactcttccgtgggaaggagaggg 83
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 gctcgctgctcatgtggggcctgctctggtcctccccactcttccgtgggaaggagaggg 283
Query: 84 tgagggaggggaaatccctgggcacttgagagtcaaaagccttaggagagtggagtttct 143
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 tgagggaggggaaatccctgggcacttgagagtcaaaagccttaggagagtggagtttct 343
Query: 144 ggaatggccggttggaactggttcttgagccttggctttgctccgctaccctccatcctg 203
|||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 344 ggaatggccggtcggaactggttcctgagccttggctttactccgctaccctccatcctg 403
Query: 204 tttgaatttcgactctctcccacccaccctcccgcccggtttctttttctcagaaagatc 263
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 404 tttgaatttcgactctctcccacccaccc----gcccggtttctttttctcagaaagatc 459
Query: 264 attttattgtcttttataggcccccccccactttgcctcacacagagtaccagctcccag 323
|||||||||||||||| || ||||||||| ||||||||||||||||||||||||||||||
Sbjct: 460 attttattgtcttttaaagcccccccccccctttgcctcacacagagtaccagctcccag 519
Query: 324 ctaatggctgtgg 336
|||||||||||||
Sbjct: 520 ctaatggctgtgg 532
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 336
Length of database: 732
Length adjustment: 9
Effective length of query: 327
Effective length of database: 723
Effective search space: 236421
Effective search space used: 236421
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no189_d02.g1 MSMg01no189_d02.g1 CHROMAT_FILE:
MSMg01no189_d02.g1 PHD_FILE: MSMg01no189_d02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:05:06 2005
(282 letters)
>mm_chr2_32056314_32056995
Length = 682
Score = 530 bits (274), Expect = e-155
Identities = 280/282 (99%)
Strand = Plus / Minus
Query: 1 tgtttcaagtaagagggccaggccctcagagcaggaagcagggcatttgtcttaaagccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 tgtttcaagtaagagggccaggccctcagagcaggaagcagggcatttgtcttaaagccc 423
Query: 61 gacgatgagtctgatccctggaaaccacatgaaggcggaagaagaaaaccaacttcccaa 120
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 422 gacgatgagtctgatccctggaaaccacatgaaggcagaagaagaaaaccaacttcccaa 363
Query: 121 agtgctcgagtctgtgcaaatgtgcacgggggttgggggaaggagggacagagggagagt 180
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 agtgctcgagtctgtgcgaatgtgcacgggggttgggggaaggagggacagagggagagt 303
Query: 181 gcgtgcatttgctaagcgcccatgtatataccagggctgccactaaacagccaggcacag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 gcgtgcatttgctaagcgcccatgtatataccagggctgccactaaacagccaggcacag 243
Query: 241 accccgggccacagtacctggtagtcaggcccagaggcccaa 282
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 accccgggccacagtacctggtagtcaggcccagaggcccaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 282
Length of database: 682
Length adjustment: 9
Effective length of query: 273
Effective length of database: 673
Effective search space: 183729
Effective search space used: 183729
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
