Query= MSMg01no189_d17.b1 MSMg01no189_d17.b1 CHROMAT_FILE:
MSMg01no189_d17.b1 PHD_FILE: MSMg01no189_d17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:05:09 2005
(315 letters)
>mm_chr2_102490105_102490819
Length = 715
Score = 578 bits (299), Expect = e-169
Identities = 308/311 (99%)
Strand = Plus / Minus
Query: 5 gaattctaatagaaacagtgaattcattcttgcctagatagaggatgtgggagagaagat 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 gaattctaatagaaacagtgaattcattcttgcctagatagaggatgtgggagagaagat 456
Query: 65 aatgcaaatggtgaactgtgaggtctctggctgtcattcccaaatcagcatctctagtac 124
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 aatgcaaatgatgaactgtgaggtctctggctgtcattcccaaatcagcatctctagtac 396
Query: 125 aagatcccttggggcccagggtcaaggttagctcagattcatttatgagaaccataaaaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 aagatcccttggggcccagggtcaaggttagctcagattcatttatgagaaccataaaaa 336
Query: 185 tcacagttctttgagtttgagtgtctgtctcttgataggctgatgttatatgaaatgggg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tcacagttctttgagtttgagtgtctgtctcttgataggctgatgttatatgaaatgggg 276
Query: 245 agacgtttggaaagtgagtggtggtatttgaatttctacacccagtttctctccattttt 304
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 275 agacgtttggaaagcgagtggtggtatttgaatttctacacccagtttctctccattctt 216
Query: 305 agcaaaggtat 315
|||||||||||
Sbjct: 215 agcaaaggtat 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 715
Length adjustment: 9
Effective length of query: 306
Effective length of database: 706
Effective search space: 216036
Effective search space used: 216036
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no189_d17.g1 MSMg01no189_d17.g1 CHROMAT_FILE:
MSMg01no189_d17.g1 PHD_FILE: MSMg01no189_d17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:05:09 2005
(322 letters)
>mm_chr2_102453286_102454007
Length = 722
Score = 563 bits (291), Expect = e-165
Identities = 315/323 (97%), Gaps = 2/323 (0%)
Strand = Plus / Plus
Query: 1 ccttgaagatggttctcacagcatccctgtacagttgtacctgatggtctgagtgtctgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccttgaagatggttctcacagcatccctgtacagttgtacctgatggtctgagtgtctgc 260
Query: 61 ttcctttttatgctatgtcccatggggctgtgcagggaaagatgctttactgctcgaa-t 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct: 261 ttcctttttatgctatgtcccatggggctgtgcagggaaagatgctttactgctc-aagt 319
Query: 120 ggaggatagtaaacctgtgactaggctgttattctgtaatggcaccctcagaatagactg 179
|||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 320 ggaggatagtaagcctgtgactaggctgtcattctgtaatggcaccctcagaatagactg 379
Query: 180 aggagacacagtgggaagcatttgtagttatttgtagcaagcagccagagctggcagtca 239
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 380 aggagacacagtgggaagcatttgtagttatttggagcaagcagccagagctggcagtca 439
Query: 240 aggtagccagtgtggaaagtggtagctcattagcctgtggccctgtgactgaagaagcag 299
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 aggtagcctgtgtggaaagtggtagctcattagcctgtggccctgtgactgaagaagcag 499
Query: 300 cttctatctctgaggagaactgg 322
|||| |||||||||||| |||||
Sbjct: 500 cttccatctctgaggagcactgg 522
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 322
Length of database: 722
Length adjustment: 9
Effective length of query: 313
Effective length of database: 713
Effective search space: 223169
Effective search space used: 223169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
