CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTAACTATACAGTTGCCCATTGACAGATAGCTTCTGGACCTTTGAAA
AGTGTAATAATACCACAGTGAAATTGTTTGGAGATAATGGAATTATTCCC
ATCCCTGTGAAATTTTTGTTATTTTGTTATTTATGTATAAGGAAGTTGAA
CCTGGGAGACAATGAGTGTGAATTTTTTTTTCTGGTTAAATAAGTTTTCT
GATTTGAAAAATACAAACAAAAATAAGAAAATGAAGACCAAGAAGAAGAG
AATGAGGGAAAGAAGGAAAGACAAAGAAGGAATAGGTTATTATTAATAAG
AAAATAAAATTTTGTACTTTGCCGCTCTTCGATAGCATTTTCAGAATTCT
TGTTTTTTTTTTTAAAGGTGATGAATTTTTCTCTTTTTAAAGAATAAGTT
AGGATTTTTGGCAACATTACATATGCTTATAAAGCATCCCAGTTACTCTC
TTTCCATAGGTTCTTTTAACTTCCTCCTATTTCTTTGGACTTTGCCTCCT
CCCTATGAGTCTGTTTTCCAACTGACGATTTTTTGTTTGCTTGTTTAGTT
GTGTGAACCCACTTTAAAAGGGCCATCTGTTCGAGGGTTGGATAGTACTA
TCCACTGTAGCCTGGTAAAGTCACCAGGGCACAGAACTAAAGCCTGTATC
AGCTTCTCTCCCCCACCCTTTCCTGGCCAATTGAATAT

NNNNNTGGAACAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGAATCAGGCCAGT
AGCCCAGAATAAGCACACATTAAAAAGCAGGGAGAGAGAGAGAGAGAGAG
AGAGAGAGAGAGAGAGAGAGAGAGAGAGACAGAGACAGAGACAGAGACAG
AGACAGAGACAGAGACAGAGACAGAGACAGAGACAGAGACAGAGACAGAG
ACAGAGACCTGATTTGAGTGAAACACAAGGATTTCTTTCATTGATGACAA
GGCCCTGGAATCTCCTTGTTAGGTGGAAAGAAATCAGAGACAAAATGCCT
AAGGATAAGTCTTTGAAAGGCAAGATCTGTCGAACTATCTCGCACAATTT
TATGAAAAGCAGGACTTGAGCAGTGTTACCCATAAAGTCTGTAGGGCTAC
GGAGGATACTACTTTCTAGCACACCACTCTGCCTACTCCCAATTAATGAG
TTGTTATTTACAGCTATATTAGAAATTCACCCACCACCTTCAGAACTTAT
CTGGGAATGGAGTGTTTAATCTCCCAATAACAATGTGGCTTTGCTCAGTT
TAAATACATTGATCATTTTGATATTTGAATATTAGCCTAACAATTGCAAG
GACAGTGCAGATTGATTGGTGGGAATAGCACAACTATGCTTAGGATATCT
GGGCCTTTTCTCCTTGATTTTCTGTTTATGCCACTCAATAGTTTATACTC
A

Query= MSMg01no189_f16.b1 MSMg01no189_f16.b1 CHROMAT_FILE:
MSMg01no189_f16.b1 PHD_FILE: MSMg01no189_f16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:05:19 2005
         (323 letters)



>mm_chr2_137409587_137410309
          Length = 723

 Score =  617 bits (319), Expect = 0.0
 Identities = 319/319 (100%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctaactatacagttgcccattgacagatagcttctggacctttgaaaagtgtaat 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctaactatacagttgcccattgacagatagcttctggacctttgaaaagtgtaat 264

                                                                       
Query: 65  aataccacagtgaaattgtttggagataatggaattattcccatccctgtgaaatttttg 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aataccacagtgaaattgtttggagataatggaattattcccatccctgtgaaatttttg 324

                                                                       
Query: 125 ttattttgttatttatgtataaggaagttgaacctgggagacaatgagtgtgaatttttt 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttattttgttatttatgtataaggaagttgaacctgggagacaatgagtgtgaatttttt 384

                                                                       
Query: 185 tttctggttaaataagttttctgatttgaaaaatacaaacaaaaataagaaaatgaagac 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tttctggttaaataagttttctgatttgaaaaatacaaacaaaaataagaaaatgaagac 444

                                                                       
Query: 245 caagaagaagagaatgagggaaagaaggaaagacaaagaaggaataggttattattaata 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 caagaagaagagaatgagggaaagaaggaaagacaaagaaggaataggttattattaata 504

                              
Query: 305 agaaaataaaattttgtac 323
           |||||||||||||||||||
Sbjct: 505 agaaaataaaattttgtac 523


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 323
Length of database: 723
Length adjustment: 9
Effective length of query: 314
Effective length of database: 714
Effective search space:   224196
Effective search space used:   224196
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no189_f16.g1 MSMg01no189_f16.g1 CHROMAT_FILE:
MSMg01no189_f16.g1 PHD_FILE: MSMg01no189_f16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:05:19 2005
         (290 letters)



>mm_chr2_137453571_137454260
          Length = 690

 Score =  342 bits (177), Expect = 1e-98
 Identities = 186/189 (98%)
 Strand = Plus / Minus

                                                                       
Query: 102 gagacagagacagagacagagacagagacagagacagagacagagacagagacagagaca 161
           |||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gagagagagagagagagagagacagagacagagacagagacagagacagagacagagaca 502

                                                                       
Query: 162 gagacagagacctgatttgagtgaaacacaaggatttctttcattgatgacaaggccctg 221
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gagacagagacctgatttgagtgaaacacaaggatttctttcattgatgacaaggccctg 442

                                                                       
Query: 222 gaatctccttgttaggtggaaagaaatcagagacaaaatgcctaaggataagtctttgaa 281
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaatctccttgttaggtggaaagaaatcagagacaaaatgcctaaggataagtctttgaa 382

                    
Query: 282 aggcaagat 290
           |||||||||
Sbjct: 381 aggcaagat 373


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 54
Number of extensions: 15
Number of successful extensions: 15
Number of sequences better than 10.0: 1
Number of HSP's gapped: 15
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 690
Length adjustment: 9
Effective length of query: 281
Effective length of database: 681
Effective search space:   191361
Effective search space used:   191361
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)