Query= MSMg01no191_d20.b1 MSMg01no191_d20.b1 CHROMAT_FILE:
MSMg01no191_d20.b1 PHD_FILE: MSMg01no191_d20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:07:46 2005
(312 letters)
>mm_chr2_141428996_141429710
Length = 715
Score = 572 bits (296), Expect = e-168
Identities = 307/312 (98%), Gaps = 3/312 (0%)
Strand = Plus / Plus
Query: 4 ggaattccacagctcctgagaaatatgcatcctt---ctgtcagacttttgctttttcat 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 204 ggaattccacagctcctgagaaatatgcatccttctcctgtcagacttttgctttttcat 263
Query: 61 tacttggaggtggttggagaaataggggaaacgagaagcttgatagtattctctcttaga 120
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 264 tacttggaggtggttggagaaataggggaaatgagaagcttgatagtattctctcttaga 323
Query: 121 cctgtggaaaaagtttctgtgggtgggatctatgaatgggattcaggacataccatgcca 180
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 324 cctgtggaaaaagtttctgtgggtgggatctatgaatgggattcaggacatatcatgcca 383
Query: 181 aaatggggcaactcagtatttgagaaaagagcaggagtatgaaaattattccctttccct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 aaatggggcaactcagtatttgagaaaagagcaggagtatgaaaattattccctttccct 443
Query: 241 ctgcacttcacagaaatgggacctaagactccatgtgagaggtgagttccctatatgtct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ctgcacttcacagaaatgggacctaagactccatgtgagaggtgagttccctatatgtct 503
Query: 301 agaaaaggaacg 312
||||||||||||
Sbjct: 504 agaaaaggaacg 515
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 312
Length of database: 715
Length adjustment: 9
Effective length of query: 303
Effective length of database: 706
Effective search space: 213918
Effective search space used: 213918
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no191_d20.g1 MSMg01no191_d20.g1 CHROMAT_FILE:
MSMg01no191_d20.g1 PHD_FILE: MSMg01no191_d20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:07:46 2005
(284 letters)
>mm_chr2_141581991_141582672
Length = 682
Score = 509 bits (263), Expect = e-148
Identities = 276/281 (98%), Gaps = 2/281 (0%)
Strand = Plus / Minus
Query: 1 atgaggctcagagagagaggaggaagggagactttttcagaaaaatgggcaggttttaga 60
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 atgaggctcagagagaaaggaggaagggagactttttcagaaaaatgggcaggttttaga 420
Query: 61 gtactgggatggaagaagtgtgtgctaaaacacttctataagtgacctgactgtgtttaa 120
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 419 gtactgggatggaagaagtgtgtgctaaaacacttctataagtgacctgattgtgtttaa 360
Query: 121 tacaatagctctggctaggccaatactgagtaaaagtgttttatcaggacctgtgggatt 180
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 tacaatagctctgactaggccaatactgagtaaaagtgttttatcaggacctgtgggatt 300
Query: 181 ctaggaaggagtggcatgtaaataaaacagttttaatttttttttcttaacttatttttc 240
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 299 ctaggaaggagtggcatgtaaataaaacagttttaa--tttttttcttaacttatttttc 242
Query: 241 tgaagtttctataggtcatgtcgttagtgaagtattccata 281
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgaagtttctataggtcatgtcgttagtgaagtattccata 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 284
Length of database: 682
Length adjustment: 9
Effective length of query: 275
Effective length of database: 673
Effective search space: 185075
Effective search space used: 185075
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
