| Query= MSMg01no191_h14.g1 MSMg01no191_h14.g1 CHROMAT_FILE:
MSMg01no191_h14.g1 PHD_FILE: MSMg01no191_h14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:08:05 2005
(244 letters)
>mm_chr2_88255140_88255783
Length = 644
Score = 410 bits (212), Expect = e-119
Identities = 242/266 (90%), Gaps = 22/266 (8%)
Strand = Plus / Plus
Query: 1 taaatattccaagaattcagtgaatttgacttctttgaagaaattgatattttcttatca 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 taaatattccaagaattcaatgaatttgacttctttgaagaaattgatattttcttatca 260
Query: 61 aaagataacaggtaaaaagggaagagattccctagttaaatattttatctctaaacaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaagataacaggtaaaaagggaagagattccctagttaaatattttatctctaaacaaaa 320
Query: 121 gtattttcattaaaggtcaaggagagaatcaatcatatatatatatatatatatatatat 180
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtattttcattaaaggtcaaagagagaatcaatcatatatatatatatatatatatatat 380
Query: 181 atat----------------------tactttatccatcaagaataagataacaatccaa 218
|||| ||||||||||||||||||||||||||||||||||
Sbjct: 381 atatatatatatatatatatatagattactttatccatcaagaataagataacaatccaa 440
Query: 219 taggatttgattcatgaaatttgaga 244
||||||||||||||||||||||||||
Sbjct: 441 taggatttgattcatgaaatttgaga 466
Score = 60.7 bits (31), Expect = 8e-14
Identities = 34/35 (97%), Gaps = 1/35 (2%)
Strand = Plus / Minus
Query: 151 aatc-atatatatatatatatatatatatatatat 184
|||| ||||||||||||||||||||||||||||||
Sbjct: 407 aatctatatatatatatatatatatatatatatat 373
Score = 58.7 bits (30), Expect = 3e-13
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 155 atatatatatatatatatatatatatatat 184
||||||||||||||||||||||||||||||
Sbjct: 384 atatatatatatatatatatatatatatat 355
Score = 58.7 bits (30), Expect = 3e-13
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 155 atatatatatatatatatatatatatatat 184
||||||||||||||||||||||||||||||
Sbjct: 386 atatatatatatatatatatatatatatat 357
Score = 58.7 bits (30), Expect = 3e-13
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 155 atatatatatatatatatatatatatatat 184
||||||||||||||||||||||||||||||
Sbjct: 388 atatatatatatatatatatatatatatat 359
Score = 58.7 bits (30), Expect = 3e-13
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 155 atatatatatatatatatatatatatatat 184
||||||||||||||||||||||||||||||
Sbjct: 390 atatatatatatatatatatatatatatat 361
Score = 58.7 bits (30), Expect = 3e-13
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 155 atatatatatatatatatatatatatatat 184
||||||||||||||||||||||||||||||
Sbjct: 392 atatatatatatatatatatatatatatat 363
Score = 58.7 bits (30), Expect = 3e-13
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 155 atatatatatatatatatatatatatatat 184
||||||||||||||||||||||||||||||
Sbjct: 394 atatatatatatatatatatatatatatat 365
Score = 58.7 bits (30), Expect = 3e-13
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 155 atatatatatatatatatatatatatatat 184
||||||||||||||||||||||||||||||
Sbjct: 396 atatatatatatatatatatatatatatat 367
Score = 58.7 bits (30), Expect = 3e-13
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 155 atatatatatatatatatatatatatatat 184
||||||||||||||||||||||||||||||
Sbjct: 398 atatatatatatatatatatatatatatat 369
Score = 58.7 bits (30), Expect = 3e-13
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 155 atatatatatatatatatatatatatatat 184
||||||||||||||||||||||||||||||
Sbjct: 400 atatatatatatatatatatatatatatat 371
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 54
Number of extensions: 25
Number of successful extensions: 25
Number of sequences better than 10.0: 1
Number of HSP's gapped: 17
Number of HSP's successfully gapped: 11
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
