Query= MSMg01no192_c05.b1 MSMg01no192_c05.b1 CHROMAT_FILE:
MSMg01no192_c05.b1 PHD_FILE: MSMg01no192_c05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:09:07 2005
(423 letters)
>mm_chr2_85085134_85085956
Length = 823
Score = 716 bits (370), Expect = 0.0
Identities = 397/406 (97%)
Strand = Plus / Plus
Query: 16 gaattcatgtccttgatcttccagtttatatggaaactcttgccctctataatactggcc 75
|||||||||||||||||||||||||||| |||| | ||||||||||||||||||||||||
Sbjct: 216 gaattcatgtccttgatcttccagtttacatgggagctcttgccctctataatactggcc 275
Query: 76 tgcttcccccaacttaacattcagcagagaaggtcgaatccttctcctagcatctctcct 135
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 276 tgcttcccccaacttaacattcagcagagaaggtcaaatccttctcctagcatctctcct 335
Query: 136 tgactcagctcaaagcattctgttcatttagggaatcgtgtaattagatcaagcctgcct 195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 tgactcagctcaaagcattctgttcatttagggaatcgtgtaattagatcaagcctgcct 395
Query: 196 agatgaactatctcctctccctttcaaggcacttaactttaatcacatctgcaaagcccc 255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 agatgaactatctcctctccctttcaaggcacttaactttaatcacatctgcaaagcccc 455
Query: 256 tttgccatggtaacatagtcacatgtgctagggttaagatctggatgtctccgtgacgtg 315
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 456 tttgccatggcaacatagtcacatgtgctagggttaagatctggatgtctccgtgacgag 515
Query: 316 ggtaggtggggaggacatttctctgctgaccacctatctcaggacagtaaggctcctaca 375
||||||||||||| |||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 516 ggtaggtggggagaacatttctttggtgaccacctatctcaggacagtaaggctcctaca 575
Query: 376 cagttctcttagctctgtgactgctatccaaatttaggcagtttca 421
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 cagttctcttagctctgtgactgctatccaaatttaggcagtttca 621
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 423
Length of database: 823
Length adjustment: 9
Effective length of query: 414
Effective length of database: 814
Effective search space: 336996
Effective search space used: 336996
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no192_c05.g1 MSMg01no192_c05.g1 CHROMAT_FILE:
MSMg01no192_c05.g1 PHD_FILE: MSMg01no192_c05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:09:07 2005
(756 letters)
>mm_chr2_85242374_85243529
Length = 1156
Score = 1038 bits (537), Expect = 0.0
Identities = 550/555 (99%), Gaps = 2/555 (0%)
Strand = Plus / Minus
Query: 1 ccagtgaatggcccaactcctataaacacataccatagacctactggatttagaaggttg 60
|||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 553 ccagtgaatggcccaactcctataaacacatatgagagacctactggatttagaaggttg 494
Query: 61 tttggctttgtattgtatgtttgtttacttgtttttaagaaggggacataaagttaggag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 tttggctttgtattgtatgtttgtttacttgtttttaagaaggggacataaagttaggag 434
Query: 121 gggaatatttggggagaatatacagggaaaagagaaaaaggggtagatataatatcatac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 gggaatatttggggagaatatacagggaaaagagaaaaaggggtagatataatatcatac 374
Query: 181 gaaattctcaaagagtaaaagccaatgttcattaaaattggaaatagtttctccataaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 gaaattctcaaagagtaaaagccaatgttcattaaaattggaaatagtttctccataaac 314
Query: 241 atgtgctaaattttgtatgtaatgtattagaatcaagtgctttatgatattttaaaatac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 atgtgctaaattttgtatgtaatgtattagaatcaagtgctttatgatattttaaaatac 254
Query: 301 tagatcaaaaatcaattaatgctttgaaatattttaatctttccaaggcatggatacaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 253 tagatcaaaaatcaattaatgctttgaaatattttaatctttccaaggcatggat--aca 196
Query: 361 cacacacacacacaaatgttcataaacagacatacattcacacatacgattagactctac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 cacacacacacacaaatgttcataaacagacatacattcacacatacgattagactctac 136
Query: 421 atgtttagtcaacttagtcaacattgtttaaaaattaatattgagaataattgataaaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 atgtttagtcaacttagtcaacattgtttaaaaattaatattgagaataattgataaaat 76
Query: 481 aaaaccataatacaaagtatcattgttcaaccaacattagctaaggttaatgcaatgtaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 aaaaccataatacaaagtatcattgttcaaccaacattagctaaggttaatgcaatgtaa 16
Query: 541 gaagaaagtagtttt 555
|||||||||||||||
Sbjct: 15 gaagaaagtagtttt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 756
Length of database: 1156
Length adjustment: 10
Effective length of query: 746
Effective length of database: 1146
Effective search space: 854916
Effective search space used: 854916
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
|
