Query= MSMg01no192_i02.b1 MSMg01no192_i02.b1 CHROMAT_FILE:
MSMg01no192_i02.b1 PHD_FILE: MSMg01no192_i02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:09:57 2005
(429 letters)
>mm_chr2_144460009_144460839
Length = 831
Score = 764 bits (395), Expect = 0.0
Identities = 407/411 (99%), Gaps = 2/411 (0%)
Strand = Plus / Minus
Query: 19 tattttc-accttgaatttctgttggcaggatatacggcacatgcttcactgtggttctc 77
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 tattttcaaccttgaatttctgttggcaggatatacggcacatgcttcactgtggttctc 570
Query: 78 attccaagtagtgagaaattatttttcttttcctgtttttcttcagttgggaacagaact 137
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 attccaagtagtgagaaattatttttcttttcctgtttttcttcagttgggaacagaact 510
Query: 138 attatctgaatttccatttgtacacacaataaatccaaagacaggttttaagaggtctta 197
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 attatctgaatttccatttgtacacacaataaatccaaagacaggttttaagaggtctta 450
Query: 198 aaatggtaacatttttttccagtccagatcaaagggtgaagtccccaagaaaaattacac 257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 aaatggtaacatttttttccagtccagatcaaagggtgaagtccccaagaaaaattacac 390
Query: 258 tggccagggaaaataaatacacttttaaaa-taaaagacaagaacatatctacaaaatta 316
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 389 tggccagggaaaataaatacacttttaaaaataaaagacaagaacatatctacaaaatta 330
Query: 317 catctggtttcatgtggtgatataatcgagttgttcttaactataagtctcagggttaca 376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 329 catctggtttcatgtggtgatataatcgagttgttcttaactataagtctcagggttcca 270
Query: 377 cccagggctgtaggacaagcacgtgtcaaacatgtttgtgccacatgtttc 427
|||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 cccagggctgcaggacaagcacgtgtcaaacatgtttgtgccacatgtttc 219
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 429
Length of database: 831
Length adjustment: 9
Effective length of query: 420
Effective length of database: 822
Effective search space: 345240
Effective search space used: 345240
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no192_i02.g1 MSMg01no192_i02.g1 CHROMAT_FILE:
MSMg01no192_i02.g1 PHD_FILE: MSMg01no192_i02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:09:57 2005
(326 letters)
>mm_chr2_144359274_144360000
Length = 727
Score = 603 bits (312), Expect = e-177
Identities = 325/334 (97%), Gaps = 8/334 (2%)
Strand = Plus / Plus
Query: 1 actctgtagaccaggctggcctcgaactcagaaatctgcctgcttctgccctccaagtgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actctgtagaccaggctggcctcgaactcagaaatctgcctgcttctgccctccaagtgc 260
Query: 61 tgggattaaaggtgtgcgccaccgaagtgaaactatcaggaagatgagattagggtaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgggattaaaggtgtgcgccaccgaagtgaaactatcaggaagatgagattagggtaaaa 320
Query: 121 gattggaaaggagatgtgatgtaagctaattcaaccatgttcgtggtttgtgtggtggg- 179
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gattggaaaggagatgtgatgtaagctaattcaaccatgttcgtggtttgtgtggtgggg 380
Query: 180 -------tttttttttttttcattacaaaaatgttgttgttttatatatattttagaaaa 232
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttttttttttttttttttttcattacaaaaatgttgttgttttatatatattttagaaaa 440
Query: 233 tgtccctctagatggtgatacatcactttatcctattacgaggagaggcagaggcaggtg 292
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 441 tgtccctctagatggtgatacatcactttatcctagtacgaggagaggcagaggcaggtg 500
Query: 293 gatctctgagttcaaggccagcatggtctgtacc 326
||||||||||||||||||||||||||||||||||
Sbjct: 501 gatctctgagttcaaggccagcatggtctgtacc 534
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 326
Length of database: 727
Length adjustment: 9
Effective length of query: 317
Effective length of database: 718
Effective search space: 227606
Effective search space used: 227606
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
