Query= MSMg01no194_p14.b1 MSMg01no194_p14.b1 CHROMAT_FILE:
MSMg01no194_p14.b1 PHD_FILE: MSMg01no194_p14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:14:01 2005
(431 letters)
>mm_chr2_113259723_113260553
Length = 831
Score = 743 bits (384), Expect = 0.0
Identities = 414/424 (97%), Gaps = 2/424 (0%)
Strand = Plus / Minus
Query: 5 gaattctctttcttgcccaaaaaggacttatcaatgtattcaaattcatgataaacattc 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 gaattctctttcttggccaaaaaggacttatcaatgtattcaaattcatgataaacattc 568
Query: 65 actgggaaaaattacagtaaataggaaaatagggatcttacagcctgaggttgatgagaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 actgggaaaaattacagtaaataggaaaatagggatcttacagcctgaggttgatgagaa 508
Query: 125 atcataaatcagtacaagattgtcagcaatgcttcagtgtaacgaaaagggttgggctga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 atcataaatcagtacaagattgtcagcaatgcttcagtgtaacgaaaagggttgggctga 448
Query: 185 tgggtgttgtagagacaaatgtatctatcaggagtcgggcttttactgtgggctcacatg 244
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 447 tgggtgttgtagagacaaatgtatctatcaggagtcgggcttttattgtgggctcacatg 388
Query: 245 ttacacaaccaaaggagaattatataggccaggt-gtgagtctgctaataaacacaattt 303
||||||||||||||||||||||||||||||| || ||||||||||| |||||||||| ||
Sbjct: 387 ttacacaaccaaaggagaattatataggcca-gtggtgagtctgctgataaacacaagtt 329
Query: 304 ccaactaattaatgctctcttcccttatttgaaatgaaaatgtacagatgaagggcagga 363
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 ccaaataattaatgctctcttcccttatttgaaatgaaaatgtacagatgaagggcagga 269
Query: 364 atgtacccgattcctgggaaaagccacaggcttgctcacacccagggatggggtggggtg 423
|| ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct: 268 atatacccgattcctggggaaagccacgggcttgctcacacccagggatggggtggggtg 209
Query: 424 ggtg 427
||||
Sbjct: 208 ggtg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 431
Length of database: 831
Length adjustment: 9
Effective length of query: 422
Effective length of database: 822
Effective search space: 346884
Effective search space used: 346884
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no194_p14.g1 MSMg01no194_p14.g1 CHROMAT_FILE:
MSMg01no194_p14.g1 PHD_FILE: MSMg01no194_p14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:14:02 2005
(286 letters)
>mm_chr2_113189770_113190458
Length = 689
Score = 536 bits (277), Expect = e-157
Identities = 285/289 (98%), Gaps = 3/289 (1%)
Strand = Plus / Plus
Query: 1 taatgatccaaaaa---aaaatgtcttttaggggaaagacgtgaaggttataaatgtgtt 57
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 taatgatccaaaaataaaaaatgtcttttaggggaaagacgtgaaggttataaatgtgtt 260
Query: 58 tggttcacatagctgtgcagtgcagctacattgatttctcatactgtcaggccctgaagg 117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggttcacatagctgtgcagtgcagctacattgatttctcatactgtcaggccctgaagg 320
Query: 118 gaggattaccttgataaatcctgatctcttaatccacatacaatccttcagctggaaagt 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaggattaccttgataaatcctgatctcttaatccacatacaatccttcagctggaaagt 380
Query: 178 tgatttatcagaaagtatgtgcccactttaaagcatgtcatttcttaatctgatggcaaa 237
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 381 tgatttatcagaaagtatgtgcccactttaaagaatgtcatttcttaatctgatggcaaa 440
Query: 238 aaaaggtgcttaataatttgcaactgtatcatttcgtatcatttgcaac 286
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaaaggtgcttaataatttgcaactgtatcatttcgtatcatttgcaac 489
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 689
Length adjustment: 9
Effective length of query: 277
Effective length of database: 680
Effective search space: 188360
Effective search space used: 188360
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
