Query= MSMg01no195_m03.b1 MSMg01no195_m03.b1 CHROMAT_FILE:
MSMg01no195_m03.b1 PHD_FILE: MSMg01no195_m03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:15:04 2005
(323 letters)
>mm_chr2_91641061_91641782
Length = 722
Score = 596 bits (308), Expect = e-175
Identities = 317/320 (99%), Gaps = 3/320 (0%)
Strand = Plus / Plus
Query: 5 gaattctcaaatgtcctttatccacattctctaaatgcttggattttgccacatctgttg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctcaaatgtcctttatccacattctctaaatgcttggattttgccacatctgttg 264
Query: 65 tattactctcttttgttctctctatatctgaatatgatttttttatggttggctattgtt 124
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 265 tattactctcttttgttctctctatatctgaatatgatttttt-atggttggctattgtt 323
Query: 125 atattcatattttatatttgttattacgtttttaaaaaatattgaatcatctcattagtt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 atattcatattttatatttgttattacgtttttaaaaaatattgaatcatctcattagtt 383
Query: 185 tgatagagaagtggcctttga-gctttctaaagaatgctgttattggtgaaaggctttta 243
||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tgatagagaagtggccttt-atgctttctaaagaatgctgttattggtgaaaggctttta 442
Query: 244 agtagtcctcgtgtattttacacatatggctacacatacagcacaaattgtagtgttttc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 agtagtcctcgtgtattttacacatatggctacacatacagcacaaattgtagtgttttc 502
Query: 304 tttctggtctccagtaattc 323
||||||||||||||||||||
Sbjct: 503 tttctggtctccagtaattc 522
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 323
Length of database: 722
Length adjustment: 9
Effective length of query: 314
Effective length of database: 713
Effective search space: 223882
Effective search space used: 223882
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no195_m03.g1 MSMg01no195_m03.g1 CHROMAT_FILE:
MSMg01no195_m03.g1 PHD_FILE: MSMg01no195_m03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:15:04 2005
(290 letters)
>mm_chr2_91749903_91750592
Length = 690
Score = 555 bits (287), Expect = e-162
Identities = 287/287 (100%)
Strand = Plus / Minus
Query: 1 ttgacaagtcctggacttgggggctgtggtggggtggtccattcagaaaggagaaggtcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 ttgacaagtcctggacttgggggctgtggtggggtggtccattcagaaaggagaaggtcc 428
Query: 61 agaaagctccagcaatagggtgctcaatattggagcatctcatatatgttgaatatccca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 agaaagctccagcaatagggtgctcaatattggagcatctcatatatgttgaatatccca 368
Query: 121 aatgccttcaataggcttcttcttggagccaagaggcaataaaaataccaatatcagata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 aatgccttcaataggcttcttcttggagccaagaggcaataaaaataccaatatcagata 308
Query: 181 tgctgcaagttctaagtatcttttagaaacacactggtagagacagtgaacaagaggctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 tgctgcaagttctaagtatcttttagaaacacactggtagagacagtgaacaagaggctg 248
Query: 241 gaggggacttactggagaaatgtgccatggacagctgtcagaaggat 287
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 gaggggacttactggagaaatgtgccatggacagctgtcagaaggat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 690
Length adjustment: 9
Effective length of query: 281
Effective length of database: 681
Effective search space: 191361
Effective search space used: 191361
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
