Query= MSMg01no195_p08.b1 MSMg01no195_p08.b1 CHROMAT_FILE:
MSMg01no195_p08.b1 PHD_FILE: MSMg01no195_p08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:15:20 2005
(356 letters)
>mm_chr2_109356207_109356962
Length = 756
Score = 638 bits (330), Expect = 0.0
Identities = 345/350 (98%)
Strand = Plus / Plus
Query: 7 attctcatctctccaagctgcaatgagaagcacgacacattcacatatcatgtatgttga 66
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 attctcatctcaccaagctgcaatgagaagcacgacacattcacatatcatgtatgttga 266
Query: 67 atgtctaccacatgccagacctttctctaggagcctgaggaagaaaaataaaaaacacac 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 atgtctaccacatgccagacctttctctaggagcctgaggaagaaaaataaaaaacacac 326
Query: 127 agagctcttgtctcttggagggcacatattctaaggggctcagagcatgtgaaggggtat 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 agagctcttgtctcttggagggcacatattctaaggggctcagagcatgtgaaggggtat 386
Query: 187 cacatactgtaacatgtctgcttaacatgagattcctagcatagtaagggtcccaagttt 246
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 387 cacatactgtaacatgtctgcttaacatgagattcctagcataggaagggtcccaagttt 446
Query: 247 tattgagttacatgtgcatatgagctgcatcgatttcatcaagtgggaggaaaagagaga 306
||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||
Sbjct: 447 tattgagttacatgtgcatatgagctgcaacgaattcatcaagtgggaggaaaagagaga 506
Query: 307 gcctacaaatgagcttgaatttctcataatatctggcacatttgagatgt 356
||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 507 gcctacaaatgagcttgaatttcccataatatctggcacatttgagatgt 556
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 356
Length of database: 756
Length adjustment: 9
Effective length of query: 347
Effective length of database: 747
Effective search space: 259209
Effective search space used: 259209
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no195_p08.g1 MSMg01no195_p08.g1 CHROMAT_FILE:
MSMg01no195_p08.g1 PHD_FILE: MSMg01no195_p08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:15:20 2005
(245 letters)
>mm_chr2_109497000_109497644
Length = 645
Score = 369 bits (191), Expect = e-107
Identities = 222/245 (90%), Gaps = 20/245 (8%)
Strand = Plus / Minus
Query: 1 acaggaagctgcgtagcattgtttacctgaagactcccactactttccttatatattttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 acaggaagctgcgtagcattgtttacctgaagactcccactactttccttatatattttt 255
Query: 61 gtatcccatatttcatacattttgttgcaatgatagtggatttgttactattatttttct 120
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 gtatcccgtatttcatacattttgttgcaatgatagtggatttgttactattatttttct 195
Query: 121 tttcttttcttttcttttcttttcttttcttttcttttcttttcttttcttttcttttct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 tttcttttcttttcttttcttttcttttcttttcttttcttttcttttcttttcttttct 135
Query: 181 tttcttttcttttcttttcttttcttttcaaggcatgatttgtctgtgtagccctggtca 240
||||||||||| |||| ||||||||||||||||||||| ||
Sbjct: 134 tttcttttctt--------------------ggcaggatttgtctgtgtagccctggcca 95
Query: 241 tctta 245
|||||
Sbjct: 94 tctta 90
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 76
Number of extensions: 23
Number of successful extensions: 23
Number of sequences better than 10.0: 1
Number of HSP's gapped: 18
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 645
Length adjustment: 9
Effective length of query: 236
Effective length of database: 636
Effective search space: 150096
Effective search space used: 150096
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
