Query= MSMg01no198_o05.b1 MSMg01no198_o05.b1 CHROMAT_FILE:
MSMg01no198_o05.b1 PHD_FILE: MSMg01no198_o05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:19:16 2005
(536 letters)
>mm_chr2_29786235_29787170
Length = 936
Score = 990 bits (512), Expect = 0.0
Identities = 527/532 (99%)
Strand = Plus / Minus
Query: 5 gaattctgattgtcaggccggatggtcgtgaggaccaagtggcctataggaaacagacat 64
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 936 gaattctgattgtcaggccggatggtcgtgaggaacaagtggcctataggaaacagacat 877
Query: 65 gggaggtttccccgggcaccaaggagaacactgcttcctgccggacccaccaggaggaga 124
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 876 gggaggtttccccgggcaccaaggagaacactgcttcctgcaggacccaccaggaggaga 817
Query: 125 aaagctgactccccttcagcagagcatccactacagctggaacaatacagatcaccatgg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 816 aaagctgactccccttcagcagagcatccactacagctggaacaatacagatcaccatgg 757
Query: 185 cccctgcgcaaggatgacaccgttgggaattgttcctggagtaagaggctgggagttgca 244
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 756 cccctgcgcaaggatgacaccgttgggtattgttcctggagtaagaggctgggagttgca 697
Query: 245 gttcccagaactgtgaaaccagaccacatggttacaagcacacttgccactgttaggtct 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 gttcccagaactgtgaaaccagaccacatggttacaagcacacttgccactgttaggtct 637
Query: 305 gtgtccaaacagttcattgtgaacacacctgctgtagctgggactatgcaagttgctatg 364
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 636 gtgtccaaacagttcattgtgaacacacctgctgtagctgggactatgccagttgctatg 577
Query: 365 taatgagggacgcaaacaacgtatttattttcatgacattcgtagctacagattccacag 424
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 taatgagggacgcaaacaatgtatttattttcatgacattcgtagctacagattccacag 517
Query: 425 gagcaagggagccgtgaacatctcatctccatgagccctgactaatttacctcagatact 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 gagcaagggagccgtgaacatctcatctccatgagccctgactaatttacctcagatact 457
Query: 485 aatttacctgttttcactatttcttgatacaaataaagttctatttttatta 536
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 aatttacctgttttcactatttcttgatacaaataaagttctatttttatta 405
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 536
Length of database: 936
Length adjustment: 10
Effective length of query: 526
Effective length of database: 926
Effective search space: 487076
Effective search space used: 487076
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no198_o05.g1 MSMg01no198_o05.g1 CHROMAT_FILE:
MSMg01no198_o05.g1 PHD_FILE: MSMg01no198_o05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:19:16 2005
(293 letters)
>mm_chr2_29758244_29758936
Length = 693
Score = 545 bits (282), Expect = e-160
Identities = 291/294 (98%), Gaps = 2/294 (0%)
Strand = Plus / Plus
Query: 1 ccaatcctttc-gacatagcaagttcccaatccagccatgggtattagaaacccagactc 59
||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccaatcc-ttcagacatagcaagttcccaatccagccatgggtattagaaacccagactc 259
Query: 60 aaacggccagagcaactgatgagaaggggtgagtgagctcaagaccatggaggtggtcct 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 aaacggccagagcaactgatgagaaggggtgagtgagctcaagaccatggaggtggtcct 319
Query: 120 gatagtcaaggccataggtcatgccgtgggaccccttggtagagcttttgctctcatcct 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gatagtcaaggccataggtcatgccgtgggaccccttggtagagcttttgctctcatcct 379
Query: 180 gaagcaggtatgtctctgggccctcatccttccagaaggctacctgggtaagaagggctg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gaagcaggtatgtctctgggccctcatccttccagaaggctacctgggtaagaagggctg 439
Query: 240 tctgttcctcttcctcattgtttctcggcaggaaacatttctcattgtttcttg 293
|||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 440 tctgttcctcttcctcattgtttctcggcaggaaacatttctcagtgtttcttg 493
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 693
Length adjustment: 9
Effective length of query: 284
Effective length of database: 684
Effective search space: 194256
Effective search space used: 194256
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
