Query= MSMg01no199_g09.b1 MSMg01no199_g09.b1 CHROMAT_FILE:
MSMg01no199_g09.b1 PHD_FILE: MSMg01no199_g09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:19:56 2005
(179 letters)
>mm_chr2_26965888_26966466
Length = 579
Score = 337 bits (174), Expect = 3e-97
Identities = 174/174 (100%)
Strand = Plus / Minus
Query: 5 gaattccttctccttttctttttccttcctcagtttggtcttgctagtggaatccacctt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 gaattccttctccttttctttttccttcctcagtttggtcttgctagtggaatccacctt 319
Query: 65 agaatcacagacagtcctagcctacttttcccccctctatgtcctttgtcccattccatc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 agaatcacagacagtcctagcctacttttcccccctctatgtcctttgtcccattccatc 259
Query: 125 ctgtggcatctgtcctttgcattgcttggggtatgggtgaggtagggaggggtg 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 ctgtggcatctgtcctttgcattgcttggggtatgggtgaggtagggaggggtg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 179
Length of database: 579
Length adjustment: 8
Effective length of query: 171
Effective length of database: 571
Effective search space: 97641
Effective search space used: 97641
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no199_g09.g1 MSMg01no199_g09.g1 CHROMAT_FILE:
MSMg01no199_g09.g1 PHD_FILE: MSMg01no199_g09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:19:56 2005
(610 letters)
>mm_chr2_26907679_26908688
Length = 1010
Score = 1073 bits (555), Expect = 0.0
Identities = 599/615 (97%), Gaps = 5/615 (0%)
Strand = Plus / Plus
Query: 1 acttacatgttctgcctaagatttccgtatcaaatgtgtgtttttctgcggtgctaatct 60
|||||||||||| ||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 199 acttacatgttccacctaagattcccgtatcaaatgtgtgtttttctgcggtgctattct 258
Query: 61 tttattt--ttattttttttaactgaagtaaaggacagtaggcaaaggtatctatagcca 118
||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 tttatttatttatttattttaactgaagtaaaggacagtaggcaaaggtatctatagcca 318
Query: 119 atcctgatgacaggaatttagtccctgggaccaagttctgagggttgtcgctcaggacac 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 atcctgatgacaggaatttagtccctgggaccaagttctgagggttgtcgctcaggacac 378
Query: 179 ctctgtgacacatgcatgccctcacactctg--ctggctggtttaaggtgaacttgacac 236
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 379 ctctgtgacacatgcatgccctcacactctgtgctggctggtttaaggtgaacttgacac 438
Query: 237 aagctgcagtcatttggaaagaggcaatgttagctgggaaaaaaa-tgctcctactagat 295
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 439 aagctgcagtcatttggaaagaggcaatgttagctgggaaaaaaaatgctcctactagat 498
Query: 296 tggcctgagggaagcctgtgggccactttcttgattaatgatggatgtgggagggctgag 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 tggcctgagggaagcctgtgggccactttcttgattaatgatggatgtgggagggctgag 558
Query: 356 aacattgtggaaggtgccacttctggggtatataagaaaacaggctaagatccctgagag 415
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 aacattgtggacggtgccacttctggggtatataagaaaacaggctaagatccctgagag 618
Query: 416 ctctcagacactgagccaccaaccagccagcattcatgagctggtctgaggcccccaaca 475
|||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 619 ctctcagacactgagccaccaaccaggcagcattcatgagctggtctgaggcctccaaca 678
Query: 476 catatacagcagaggactgcctggtctggcctcagtgggagaagatgcacctcgagagac 535
|||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||
Sbjct: 679 catatacagcagaggactgcctggtctggcctaagtgggagaagatgcgcctcgagagac 738
Query: 536 ttaaggcccagggagtagggaggtcttgcaggggctggggtggagggcatcctcttggaa 595
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 739 ttaaggcccagggagtagggaggccttgcaggggctggggtggagggcatcctcttggaa 798
Query: 596 acagggggaggagaa 610
|||||||||||||||
Sbjct: 799 acagggggaggagaa 813
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 610
Length of database: 1010
Length adjustment: 10
Effective length of query: 600
Effective length of database: 1000
Effective search space: 600000
Effective search space used: 600000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
