Query= MSMg01no204_p14.b1 MSMg01no204_p14.b1 CHROMAT_FILE:
MSMg01no204_p14.b1 PHD_FILE: MSMg01no204_p14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:26:43 2005
(370 letters)
>mm_chr2_143473125_143473894
Length = 770
Score = 685 bits (354), Expect = 0.0
Identities = 363/366 (99%)
Strand = Plus / Plus
Query: 5 gaattcatcatgagtgctgtctaagcttctttactgcaaagattacaggtgcttaccacc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcatcatgagtgctgtctaagcttctttactgcaaagattacaggtgcttaccacc 264
Query: 65 ataccccattatttctagctatgggaggcagcatggaaggcagttcccagactttggtgt 124
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ataccccattatttttagctatgggaggcagcatggaaggcagttcccagactttggtgt 324
Query: 125 gcctctgagccatgaatagatttgtaaaaacaaagattctgattcagggtatagggtctg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gcctctgagccatgaatagatttgtaaaaacaaagattctgattcagggtatagggtctg 384
Query: 185 agacaagcacaacccatctgattagggggcggggcctggcactacagttataacaagcct 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 agacaagcacaacccatctgattagggggcggggcctggcactacagttataacaagcct 444
Query: 245 catctgatttagggggtggggtctaacaccgcagttatagcataccccatctgattcacc 304
||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 445 catctgatttagggggtggggtctaacaccgcagttagaacataccccatctgattcacc 504
Query: 305 taggcaaagaaggatgaattctcccacttctggaccagaccattttgtctgaaagagctt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 taggcaaagaaggatgaattctcccacttctggaccagaccattttgtctgaaagagctt 564
Query: 365 tgaacc 370
||||||
Sbjct: 565 tgaacc 570
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 370
Length of database: 770
Length adjustment: 9
Effective length of query: 361
Effective length of database: 761
Effective search space: 274721
Effective search space used: 274721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no204_p14.g1 MSMg01no204_p14.g1 CHROMAT_FILE:
MSMg01no204_p14.g1 PHD_FILE: MSMg01no204_p14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:26:43 2005
(340 letters)
>mm_chr2_143562284_143563023
Length = 740
Score = 636 bits (329), Expect = 0.0
Identities = 338/341 (99%), Gaps = 2/341 (0%)
Strand = Plus / Minus
Query: 1 tttcatctgaggttgatagaataccttttgggcctaacatgacaaacaggctcccaccaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 tttcatctgaggttgatagaataccttttgggcctaacatgacaaacaggctcccaccaa 294
Query: 61 ggaagctcttttgctttctaaactagtttctttgttctctgttggttatatcattctgta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 ggaagctcttttgctttctaaactagtttctttgttctctgttggttatatcattctgta 234
Query: 121 tggaagtaggatttctttaaattaaattttgaatggagagatggctcagcatttaatagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 tggaagtaggatttctttaaattaaattttgaatggagagatggctcagcatttaatagc 174
Query: 181 aagtacttttctcgaagaggacccaaggttggctcccaaaactcaacgttggtcagctca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 aagtacttttctcgaagaggacccaaggttggctcccaaaactcaacgttggtcagctca 114
Query: 241 -cagccaatcttgactccagctccagggctactgataacctcttctgacctctgtgggcg 299
|| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113 cca-ccaaccttgactccagctccagggctactgataacctcttctgacctctgtgggcg 55
Query: 300 accacactcacctacacaaagtctcacacaaacatgcatgc 340
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 54 accacactcacctacacaaagtctcacacaaacatgcatgc 14
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 340
Length of database: 740
Length adjustment: 9
Effective length of query: 331
Effective length of database: 731
Effective search space: 241961
Effective search space used: 241961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
