CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCACTATGATTACGACAACTTTTTTTAAAAAATTGGGATAAAAATGT
GAAATATAGGAATTGGAAGTCTATGTAAATGAAGTAAAATCAGTAACATT
ATGTATTACATGACTTATTTATATTTGTGGAAAGGAGAAAAATAACATTT
CAGAAGTCACAGGTGATACAATTGAATACAGAGCAATATGAGGCTAAGCC
CACTTTTACCGAAGAATTAAATGATGGGGTCATAGTTCAGAAGACTGAGA
TTGATACTAAAGCAGCTACACTTTGTTGATAGGAATTAGAAATTCTTACA
GACTTTTGAATCATTAAGTGTTATGAAAAATATTAAATATTGTCTGCAGC
ATTGCTTCACTGTTCACCCCCCAAACCAAACTCAAAAGAATTCTGGCTCT
AACACCTGGTACTTTAGCATCTAATATTGAATTTCCTCACAAGTCCACCA
AATGGAAAGTGCATTTGGGCAAATATAGATTCATGAACGTGTAAAACATA
GATGATACACTTCTTCATAGTGACATTTTTCAGGAACCACAGAGATGCAG
GTGTGAGGTATCAGAAAAAGTCCTCTGAGCAAGATGCAAACCCGTGTCCT
GGGCAGACATGAGGAAGGTCCTCAAGTTCACTAACCTGAAACTGAAGGAA
TTCATCCAGCTGGAAAATAATACACAGAATTAACACTAAGACAGAAATGT
A

CGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXTGGGAGTAGGAGAAACAATTTTC
CTCAGGGAAGAACACATCAATTGGTTACACAATACCAGCTGGTCACCCCT
GAAAAGGAATAAACACAAGAAACATAATACAGACTGGGCAGGTTGTATTT
ATGTATTTAAGATTTATGTATGTAACAGTAATTAAAGAAAAAGAGACTAT
GAATGTGAAAGACAGCAAGGAAGGTAATATATGGGGGGTTTGGAGGGAAG
AAAAGGACTGCANAAAATGACCTTTTTTCTTTCAACCTCTTACCTTAACT
TAAAACACCCATTTTTTTTTCTCCCCCCCCCCCTCCCTTGTCCCCTTCCC
AATTATCTTTTTTTATTCCCCCCCCCCCAAAAAAAAAATAATATATTAGT
TAGCATACCCTCCCTTCCCATCCCTCCCCCTACCCCCCCAAAAATCCCCT
ACCCAATTTCTTCCTCTTCCATCTATCCTTTCGACCTTCTCACCAAACCC
GCTCACCTCCCTCCTCACGTCCACTCATCATTATTTTACTTTCCCTTCAT
TTTCCCCTTCCACTCCCAATTATTCTCTTCCCTTTTACCCCCTTCTCTTC
TCCCTTCCCTTTTACCCTCCCTCCCCCCCATTCTACAATTCCCACTCTCT
ATCCCTTATCTCCCCTTTCCCCTTTTTCCCCTTCTTTTCCTATTTTCTTT
CACCACCCCCCTATTTTTCCACTCTCTCATTTTCCTCTACCCTTCCCAAC
TCTTTTCACTCTTACCCAT

Query= MSMg01no205_g20.b1 MSMg01no205_g20.b1 CHROMAT_FILE:
MSMg01no205_g20.b1 PHD_FILE: MSMg01no205_g20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:27:18 2005
         (706 letters)



>mm_chr2_134085678_134086783
          Length = 1106

 Score = 1199 bits (620), Expect = 0.0
 Identities = 682/708 (96%), Gaps = 12/708 (1%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcactatgattacgacaac-tttttttaaaaaattgggataaaaatgtgaaatata 63
           ||||||||||||| || | |||| ||||||||||||| |||||||||||||||||||| |
Sbjct: 205 gaattcactatgaatatgccaacttttttttaaaaaa-tgggataaaaatgtgaaataga 263

                                                                       
Query: 64  ggaattggaagtctatgtaaatgaagtaaaatcagtaacattatgtattacatgacttat 123
           ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||
Sbjct: 264 ggaattggaagtctatgtaaatgaagtaaaatcagtagcattatgtattacatgacctat 323

                                                                       
Query: 124 ttatatttgtggaaaggagaaaaataacatttcagaagtcacaggtgatacaattgaata 183
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ttatatttgtggaaaggaggaaaataacatttcagaagtcacaggtgatacaattgaata 383

                                                                       
Query: 184 cagagcaatatgaggctaagcccacttttaccgaagaattaaatgatggggtcatagttc 243
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 384 cagagcaatatgaggctaagcccacttttgccgaagaattaaatgatggggtcatagttc 443

                                                                       
Query: 244 agaagactgagattgatactaaagcagctacactttgttgataggaattagaaattctta 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 agaagactgagattgatactaaagcagctacactttgttgataggaattagaaattctta 503

                                                                       
Query: 304 cagacttttgaatcattaagtgttatgaaaaatattaaatattgtctgcagcattgcttc 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 cagacttttgaatcattaagtgttatgaaaaatattaaatattgtctgcagcattgcttc 563

                                                                       
Query: 364 actgttca-----ccccccaaaccaaactcaaaagaattctggctctaacacctggtact 418
           ||||||||     |     ||||||||||||||||| |||||||||||||||||||||||
Sbjct: 564 actgttcagtgttc-----aaaccaaactcaaaagagttctggctctaacacctggtact 618

                                                                       
Query: 419 ttagcatctaatattgaatttcctcacaagtccaccaaatggaaagtgcatttgggcaaa 478
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 619 ttagcatctaatattgaatttcctcacaagtccaccaaatggaaagtgcatttgggaaaa 678

                                                                       
Query: 479 tatagattcatgaacgtgtaaaacatagatgatacacttcttcatagtgacatttttcag 538
           ||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 679 tatggattcatgaacgtgtaaaacgtagatgatacacttcttcatagtgacatttttcag 738

                                                                       
Query: 539 gaaccacagagatgcaggtgtgaggtatcagaaaaagtcctctgagcaagatgcaaaccc 598
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 gaaccacagagatgcaggtgtgaggtatcagaaaaagtcctctgagcaagatgcaaaccc 798

                                                                       
Query: 599 gtgtcctgggcagacatgaggaaggtcctcaagttcactaacctgaaactgaaggaattc 658
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 gtgtcctgggcagacatggggaaggtcctcaagttcactaacctgaaactgaaggaattc 858

                                                           
Query: 659 atccagctggaaaataatacacagaattaacactaagacagaaatgta 706
            |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 859 ctccagctggaaaataatacacagaattaacactaagacagaaatgta 906


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 706
Length of database: 1106
Length adjustment: 10
Effective length of query: 696
Effective length of database: 1096
Effective search space:   762816
Effective search space used:   762816
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)