Query= MSMg01no205_n22.b1 MSMg01no205_n22.b1 CHROMAT_FILE:
MSMg01no205_n22.b1 PHD_FILE: MSMg01no205_n22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:27:50 2005
(265 letters)
>mm_chr2_9084338_9085002
Length = 665
Score = 449 bits (232), Expect = e-130
Identities = 255/264 (96%), Gaps = 3/264 (1%)
Strand = Plus / Plus
Query: 5 gaattcttcatgcatgcactgagataaatgaggcatcttgtgataaatggaatatgcaca 64
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttcatgcatggactgagataaatgaggcatcttgtgataaatggaatatgcaca 264
Query: 65 cctataaattaggcccacaacaaacagtttgaaaaaaataaaaggaatcagtatgtggtt 124
||||||||| || | ||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 265 cctataaatcagacatacaacaaacagattgaaaaaaataaaaggaatcagtatgtggtt 324
Query: 125 atttattgctcagtgctttctctatacaagttgctttgcttttctgccacctgcagctta 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 atttattgctcagtgctttctctatacaagttgctttgcttttctgccacctgcagctta 384
Query: 185 aaataggttaggaaggtagattctctccctctccctctccctctccctctcc---ctctc 241
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 385 aaataggttaggaaggtagattctctccctctccctctccctctccctctcctccctctc 444
Query: 242 cctctccctctccctctccctctc 265
||||||||||||||||||||||||
Sbjct: 445 cctctccctctccctctccctctc 468
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 62
Number of extensions: 24
Number of successful extensions: 24
Number of sequences better than 10.0: 1
Number of HSP's gapped: 22
Number of HSP's successfully gapped: 1
Length of query: 265
Length of database: 665
Length adjustment: 9
Effective length of query: 256
Effective length of database: 656
Effective search space: 167936
Effective search space used: 167936
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no205_n22.g1 MSMg01no205_n22.g1 CHROMAT_FILE:
MSMg01no205_n22.g1 PHD_FILE: MSMg01no205_n22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:27:51 2005
(298 letters)
>mm_chr2_9263892_9264589
Length = 698
Score = 559 bits (289), Expect = e-164
Identities = 289/289 (100%)
Strand = Plus / Minus
Query: 1 taagtttcctcagtgtgcaatggaaaaaaataatttggcctctttagtttttaaacatag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 taagtttcctcagtgtgcaatggaaaaaaataatttggcctctttagtttttaaacatag 430
Query: 61 tgtaaatcagtaaggtaaatatatatagaaacccttcaggaggtttatgattatattatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 tgtaaatcagtaaggtaaatatatatagaaacccttcaggaggtttatgattatattatt 370
Query: 121 atgagaactaactataatctatatgtacaaagtaaattgaaggcataaaaagcttagccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 atgagaactaactataatctatatgtacaaagtaaattgaaggcataaaaagcttagccc 310
Query: 181 cacttttccattctcttattggaaataatgaaatataagaagtattaggtatttagagaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 cacttttccattctcttattggaaataatgaaatataagaagtattaggtatttagagaa 250
Query: 241 aagtatgttggaaaacattttaggcttgtactttcttggccaaccttta 289
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 aagtatgttggaaaacattttaggcttgtactttcttggccaaccttta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 298
Length of database: 698
Length adjustment: 9
Effective length of query: 289
Effective length of database: 689
Effective search space: 199121
Effective search space used: 199121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
