CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCAATAGCCCTTTATTTCTGCCCTTTTCCCACTTCTGTACATTCCCTG
GAGAAACAGTAGCAGCTGATTAGGATTACTGTGTTTCCAAAGAGAACTAG
ACTGTGTGCTCCTAGTTCCTCACTTACTCTTTTCCTTTCTTTCTTTCTTT
TCCATTTATTTATTTGTTTATTTTACATCTTGATCACTGCTCCACCACTC
CTGGTTGCCCCACTCCTTCCTCCCATTTCCCCCTGCCCCCTTCTCCTCTG
AGAGGATGCCTCTCTATTGTTCCCCTCCCCCTGATGCATCAAGTCTAAGC
AAGTTTAGGCACATCCTTTCCACAGTGGCCACACAAGGCAGCACAGGTAG
GGAACAGATTCCACAGACAGGCAACAGCTTTAGGGACTGTCCCTGCTCCA
GTTGTTGGGGGGAATCACATAGAGACTGAATTATACATCTGCTACATATA
TGCCAAGGACCTCGGTCCAGGCCATGTTTGCTATTTGTTTGGTGTTGGTC
CCTGAGAGTCTCCAAGGGTCCAGATTAGTTGATTCTGTTGGTTTTCCTGT
GAAGTTCCTACCCTTTTCAGGGCTCTCAGTCCTTCCCACAACTTTTACAT
AAGACTTCTGGAATTTCACCCAAGGTTTGGCTGTGGGTCTCTGCATCTGT
TTCAGTCAGCTGCTGGGTG

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXCATATCTCATGATACTGGTAGAGGAC
TTTAAGAAGGGCATTAATAAATCACTTAAAGAAGTACAGGAGAACACTGT
TAAACAGGTAGAAGTCCTTAAGAGGAAGCAAAAATATCACTCAAAGAATT
ACAGGAAAACACTGCTAAACAGGGAGAAGAAATTAAAGAGGAAACACAAA
AATCCCTTAAAGAATTACAGGAAAATACAACCAAACAGGTGATGGAATTG
AACAAATCCATCCCAGATCTAAAAATTGAAGAAGAAACAATAAAGAAAAT
CCTAAGGGAGGACAACTCTGGAGACAGAAATCAGTAAACATAGATGTGAG
CATCAGCAACAGAATACAAGAGAAGGAAGAGAGAATCTTAGGTGCAGAAG
ATACCTTAGCAAACATTGATACTACAGTCAAAGAAAATGCAAAATGCAAA
AGCTTCTAACCCAAAACATCCAGGAAATCCAGGACACAATGAGAAGACCA
AATCTACGGATAATAGGAGTTGATGAGAATGAAGATTTTCAACTCAAAGG
ACAAGTAAATATCCTCAACAAAATTATAGAAGAAAATTTCCCTAACCTAG
AGAAAAAGATGCCCATGAACACACAAGAAGCCTACAAAACTCCAAAGAGA
CTGGACCAGAAAAGAAATTCCTCCCAACACA

Query= MSMg01no206_i08.b1 MSMg01no206_i08.b1 CHROMAT_FILE:
MSMg01no206_i08.b1 PHD_FILE: MSMg01no206_i08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:28:43 2005
         (675 letters)



>mm_chr2_15707417_15708491
          Length = 1075

 Score = 1282 bits (663), Expect = 0.0
 Identities = 670/673 (99%), Gaps = 2/673 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcaatagccctttatttctgcccttttcccacttctgtacattccctggagaaaca 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaatagccctttatttctgcccttttcccacttctgtacattccctggagaaaca 264

                                                                       
Query: 65  gtagcagctgattaggattactgtgtttccaaagagaactagactgtgtgctcctagttc 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gtagcagctgattaggattactgtgtttccaaagagaactagactgtgtgctcctagttc 324

                                                                       
Query: 125 ctcacttactcttttcctttctttctttcttttccatttatttatttgtttattttacat 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ctcacttactcttttcctttctttctttcttttccatttatttatttgtttattttacat 384

                                                                       
Query: 185 cttgatcactgctccaccactcctggttgccccactccttcctcccatttccccctgccc 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cttgatcactgctccaccactcctggttgccccactccttcctcccatttccccctgccc 444

                                                                       
Query: 245 ccttctcctctgagaggatgcctctctattgttcccctccccctgatgcatcaagtctaa 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ccttctcctctgagaggatgcctctctattgttcccctccccctgatgcatcaagtctaa 504

                                                                       
Query: 305 gcaagtttaggcacatcctttccacagtggccacacaaggcagcacaggtagggaacaga 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gcaagtttaggcacatcctttccacagtggccacacaaggcagcacaggtagggaacaga 564

                                                                       
Query: 365 ttccacagacaggcaacagctttagggactgtccctgctccagttgttggggggaatcac 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ttccacagacaggcaacagctttagggactgtccctgctccagttgttggggggaatcac 624

                                                                       
Query: 425 atagagactgaattatacatctgctacatatatgccaaggacctcggtccaggccatgtt 484
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 625 atagagactgaattatacatctgctacatatatgccaaagacctcggtccaggccatgtt 684

                                                                       
Query: 485 tgctatttgtttggtgttggtccctgagagtctccaagggtccagattagttgattctgt 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tgctatttgtttggtgttggtccctgagagtctccaagggtccagattagttgattctgt 744

                                                                       
Query: 545 tggttttcctgtgaagttcctacccttttcagggctctcagtccttcccacaacttttac 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 tggttttcctgtgaagttcctacccttttcagggctctcagtccttcccacaacttttac 804

                                                                       
Query: 605 ataagacttctggaatttcacccaaggtttggctgtgggt--ctctgcatctgtttcagt 662
           ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||
Sbjct: 805 ataagacttctggaatttcacccaaggtttggctgtgggtatctctgcatctgtttcagt 864

                        
Query: 663 cagctgctgggtg 675
           |||||||||||||
Sbjct: 865 cagctgctgggtg 877


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 675
Length of database: 1075
Length adjustment: 10
Effective length of query: 665
Effective length of database: 1065
Effective search space:   708225
Effective search space used:   708225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)