Query= MSMg01no212_p18.b1 MSMg01no212_p18.b1 CHROMAT_FILE:
MSMg01no212_p18.b1 PHD_FILE: MSMg01no212_p18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:38:54 2005
(309 letters)
>mm_chr2_136995685_136996393
Length = 709
Score = 574 bits (297), Expect = e-168
Identities = 303/305 (99%)
Strand = Plus / Minus
Query: 4 ggaattcataggtcaacctcaattgccctcaatacccacaatctacccaatagataccca 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 ggaattcataggtcaacctcaattgccctcaatacccacaatctacccaatagataccca 449
Query: 64 acatgaacttggtgcatcagatctgctctcctatgcctccccactgattatcactgtaat 123
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 448 acatgaacttggtgcatcagatctgctctcctatgcttccccactgattatcactgtaat 389
Query: 124 gtctccaaggttagctttccaaaggagaaagaaataaagacaagaaagagagagtccatc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 gtctccaaggttagctttccaaaggagaaagaaataaagacaagaaagagagagtccatc 329
Query: 184 tctggatggtttgacacaaagagttagaaagtattagagattgatgggctgagggtgagc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 tctggatggtttgacacaaagagttagaaagtattagagattgatgggctgagggtgagc 269
Query: 244 atgaagcatcagacatttcaaaattcatgtgccctgaacgatagaccctttgatgtagat 303
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 atgaagcaacagacatttcaaaattcatgtgccctgaacgatagaccctttgatgtagat 209
Query: 304 gcaga 308
|||||
Sbjct: 208 gcaga 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 309
Length of database: 709
Length adjustment: 9
Effective length of query: 300
Effective length of database: 700
Effective search space: 210000
Effective search space used: 210000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no212_p18.g1 MSMg01no212_p18.g1 CHROMAT_FILE:
MSMg01no212_p18.g1 PHD_FILE: MSMg01no212_p18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:38:54 2005
(277 letters)
>mm_chr2_136897024_136897700
Length = 677
Score = 484 bits (250), Expect = e-141
Identities = 271/278 (97%), Gaps = 2/278 (0%)
Strand = Plus / Plus
Query: 1 cctctaattttgtttctatatatacttaccaagacagggagcaaatgtgtgtcaatatgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cctctaattttgtttctatatatacttaccaagacagggagcaaatgtgtgtcaatatgt 260
Query: 61 agcatgacaaagagaacttgggtgaagttttctacttgtggagacccatttggactgggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agcatgacaaagagaacttgggtgaagttttctacttgtggagacccatttggactgggc 320
Query: 121 ttgaaatatctctgggtaagtctcatctgtggcagtgtccccacactacagtaaggcttc 180
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttgaaatatctctgggtaaatctcatctgtggcagtgtccccacactacagtaaggcttc 380
Query: 181 cataaccattctaagcaaagactgcgcttttgtttattgaagtaaaatcagtaaaagtgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cataaccattctaagcaaagactgcgcttttgtttattgaagtaaaatcagtaaaagtgt 440
Query: 241 gtttttgtctccccaaggcagctgacctgg-gctaata 277
| ||| ||||||||||||||||||| || |||||||
Sbjct: 441 gcagttggctccccaaggcagctgacc-ggtgctaata 477
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 277
Length of database: 677
Length adjustment: 9
Effective length of query: 268
Effective length of database: 668
Effective search space: 179024
Effective search space used: 179024
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
