Query= MSMg01no214_e08.b1 MSMg01no214_e08.b1 CHROMAT_FILE:
MSMg01no214_e08.b1 PHD_FILE: MSMg01no214_e08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:40:32 2005
(319 letters)
>mm_chr2_4324391_4325109
Length = 719
Score = 576 bits (298), Expect = e-169
Identities = 310/314 (98%), Gaps = 2/314 (0%)
Strand = Plus / Minus
Query: 5 gaattctcctcgactacacttgcctacctaccattctgt-gtgctttcccaaagctccag 63
||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 517 gaattctcctcgactacacttgcctacctaccattct-tcgtgctttcccaaagctccag 459
Query: 64 gacctagacaatgcctcatctcttatcttggccttgggctctaactttgctgggacaatt 123
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 gacccagacaatgcctcatctcttatcttggccttgggctctaactttgctgggacaatt 399
Query: 124 aaatcactactgtacacatctggtatacaaatctcatggattaagaaaccagaaacttgc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 aaatcactactgtacacatctggtatacaaatctcatggattaagaaaccagaaacttgc 339
Query: 184 tgaacctcaaggggactcagtttccccaatggcaaaatcatactaatggcactagccacc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 tgaacctcaaggggactcagtttccccaatggcaaaatcatactaatggcactagccacc 279
Query: 244 tgctgggctaccaggggacttgtcaagatgtctaatattaccgaggcccagggccataaa 303
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 278 tgctgggctaccaggggacttgtcaagatgtctaaaattaccgaggcccagggccataaa 219
Query: 304 aagaagtcttatta 317
||||||||||||||
Sbjct: 218 aagaagtcttatta 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 719
Length adjustment: 9
Effective length of query: 310
Effective length of database: 710
Effective search space: 220100
Effective search space used: 220100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no214_e08.g1 MSMg01no214_e08.g1 CHROMAT_FILE:
MSMg01no214_e08.g1 PHD_FILE: MSMg01no214_e08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:40:32 2005
(288 letters)
>mm_chr2_4163930_4164617
Length = 688
Score = 534 bits (276), Expect = e-156
Identities = 282/284 (99%)
Strand = Plus / Plus
Query: 1 aaccccaaagcttgtgtacccccctggatctgatgatcagttgctgtagaaatggagggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaccccaaagcttgtgtacccccctggatctgatgatcagttgctgtagaaatggagggt 260
Query: 61 tgcagctcagagcctggtgggaaagatctgatgtgtttgtatggtgtatgcttcccctac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgcagctcagagcctggtgggaaagatctgatgtgtttgtatggtgtatgcttcccctac 320
Query: 121 tccactgctgtgcaatctactccatcaacagaatcctctttctaaactcttcacctgtac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tccactgctgtgcaatctactccatcaacagaatcctctttctaaactcttcacctgtac 380
Query: 181 agcctgacttgtccacccttgtacttcccttgcaagtatgttactgccctctcacccact 240
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agcctgtcttgtccacccttgtacttcccttgcaagtatgttactgccctctcacccact 440
Query: 241 agtagcatctattgaacatatcttggccaagatactgcccactc 284
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggtagcatctattgaacatatcttggccaagatactgcccactc 484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 688
Length adjustment: 9
Effective length of query: 279
Effective length of database: 679
Effective search space: 189441
Effective search space used: 189441
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
