Query= MSMg01no215_d20.b1 MSMg01no215_d20.b1 CHROMAT_FILE:
MSMg01no215_d20.b1 PHD_FILE: MSMg01no215_d20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:41:50 2005
(322 letters)
>mm_chr2_77478913_77479631
Length = 719
Score = 592 bits (306), Expect = e-173
Identities = 317/322 (98%), Gaps = 3/322 (0%)
Strand = Plus / Plus
Query: 1 atcgtttttaaaaaagaaagaaaaacattgtgtgtatcagtatctattttaggacaagga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atcgtttttaaaaaagaaagaaaaacattgtgtgtatcagtatctattttaggacaagga 260
Query: 61 aatttaaatgaccagctgcagtcattaaatacacaggatcatgaacctgtgttagaaagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aatttaaatgaccagctgcagtcattaaatacacaggatcatgaacctgtgttagaaagg 320
Query: 121 atgttagctgcagccgcttccctaactacaaaaatccacaaataaatctagcattgtctg 180
|||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atgtta---gcagccacttccctaactacaaaaatccacaaataaatctagcattgtctg 377
Query: 181 caaaagtgatgtgtagtcactggagtcagcaaggtctaaatatagtttttactcttagca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 caaaagtgatgtgtagtcactggagtcagcaaggtctaaatatagtttttactcttagca 437
Query: 241 tatgataatagcatcaagacgcacaagaaggctaaaccttcacactccaggtttctatct 300
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 tatgaaaatagcatcaagacgcacaagaaggctaaaccttcacactccaggtttctatct 497
Query: 301 atactgataatagctgttcccc 322
||||||||||||||||||||||
Sbjct: 498 atactgataatagctgttcccc 519
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 322
Length of database: 719
Length adjustment: 9
Effective length of query: 313
Effective length of database: 710
Effective search space: 222230
Effective search space used: 222230
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no215_d20.g1 MSMg01no215_d20.g1 CHROMAT_FILE:
MSMg01no215_d20.g1 PHD_FILE: MSMg01no215_d20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:41:50 2005
(289 letters)
>mm_chr2_77581145_77581833
Length = 689
Score = 497 bits (257), Expect = e-145
Identities = 281/289 (97%)
Strand = Plus / Minus
Query: 1 ttaaaatttgctctatgcacaaaccctggcaggtgttaaaccatcgcatctgctgtacaa 60
|||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||
Sbjct: 489 ttaaaatttgctctatgcacaaacccgggcaggtgttaaaccgtcgcatctgctgtacaa 430
Query: 61 ctactgcagggtctgtgacgtttgaaggaaggaatgataaacgatacctgaggtttgttt 120
|| |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct: 429 cttctgcagggtctgtgacttttgaaggaagaaatgataaacgatacctgaggtttgttt 370
Query: 121 cagtggattcattacagagtcattcctttatctgacagatgcttgagagtttggtggcaa 180
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 cagtggattcattacagagccattcctttatctgacagatgcttgagagtttggtggcaa 310
Query: 181 tccatctttttagctttcagaatggtgaaatagataaacttctaatgtccaggttcttca 240
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 tccatcttcttagctttcagaatggtgaaatagataaacttctaatgtccaggttcttca 250
Query: 241 agaaaacagagacgtttgctaggagagttggaagatgttagagtatgct 289
|| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 agtaaacagagacgtttgctaggagagttggaagatgttagagtatgct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
