Query= MSMg01no216_l20.b1 MSMg01no216_l20.b1 CHROMAT_FILE:
MSMg01no216_l20.b1 PHD_FILE: MSMg01no216_l20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:43:52 2005
(209 letters)
>mm_chr2_97453509_97454117
Length = 609
Score = 375 bits (194), Expect = e-109
Identities = 203/206 (98%)
Strand = Plus / Plus
Query: 4 ggaattcaaagccaaaagaagaaaaaaaatatctgaaggggaaaagtaggatgatctgat 63
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 204 ggaattcaaagccaaaagaagaaaaaaaatatctgaaggggaaatgtaggatgatctgat 263
Query: 64 tagaatgtaaaacagaatgccattgttactgtagtaagactctcagtaaacaaggcttgg 123
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 264 tagaatgtaaaacagaatgccattgttactgtagtaagactctcagtaaacaagtcttgg 323
Query: 124 acaatcatatgctatagcaccttggagtgaatacttctcatgccatgctaaggcactgtt 183
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 324 acaatcatatgctatagcaccttggagtgaatacttctcatgccatgttaaggcactgtt 383
Query: 184 tatctggagataatttggtcctacag 209
||||||||||||||||||||||||||
Sbjct: 384 tatctggagataatttggtcctacag 409
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 209
Length of database: 609
Length adjustment: 9
Effective length of query: 200
Effective length of database: 600
Effective search space: 120000
Effective search space used: 120000
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no216_l20.g1 MSMg01no216_l20.g1 CHROMAT_FILE:
MSMg01no216_l20.g1 PHD_FILE: MSMg01no216_l20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:43:52 2005
(385 letters)
>mm_chr2_97487072_97487856
Length = 785
Score = 650 bits (336), Expect = 0.0
Identities = 354/360 (98%), Gaps = 2/360 (0%)
Strand = Plus / Minus
Query: 1 aatgaaaatgaagacatatcaaacccaaacatatgggacacaatgaaaatagtgttaaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 aatgaaaatgaagacatatcaaacccaaacatatgggacacaatgaaaatagtgttaaga 688
Query: 61 ggaaaatacgtgccttcataaagaaattggagagattccataccagcaacttaacagagt 120
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 687 ggaaaatacgtgccttcataaagaaattggagagattccatacaagcaacttaacagagt 628
Query: 121 agctgaatgctctgcaacagatagaagcaaacacacccatgtgtagattgcaggggaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 agctgaatgctctgcaacagatagaagcaaacacacccatgtgtagattgcaggggaaaa 568
Query: 181 caaacaaacaaacaaaaacaaagagaagaaaaatcaaaacctgtagatgagtcatagtat 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 caaacaaacaaacaaaaacaaagagaagaaaaatcaaaacctgtagatgagtcatagtac 508
Query: 241 ttgtttttgttttagaaataggtg-ctaatatttgttttgaaggactctttatattattt 299
|||||||||||||||||||||| | ||||||||||||||||||||| |||||||||||||
Sbjct: 507 ttgtttttgttttagaaatagg-gactaatatttgttttgaaggacactttatattattt 449
Query: 300 tcttgtttgtttccatgtgtatccaattctcacctttattatttatttatttatttattt 359
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 448 tcttgtttgtttccatgtgtatccaattctaacctttattatttatttatttatttattt 389
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 385
Length of database: 785
Length adjustment: 9
Effective length of query: 376
Effective length of database: 776
Effective search space: 291776
Effective search space used: 291776
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
