Query= MSMg01no218_d14.b1 MSMg01no218_d14.b1 CHROMAT_FILE:
MSMg01no218_d14.b1 PHD_FILE: MSMg01no218_d14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:46:10 2005
(313 letters)
>mm_chr2_126959390_126960106
Length = 717
Score = 524 bits (271), Expect = e-153
Identities = 301/321 (93%), Gaps = 18/321 (5%)
Strand = Plus / Plus
Query: 1 cgcggaattctcatcttgctctccacgtctccggagtaagttttaaatcgcgagcgccaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cgcggaattctcatcttgctctccacgtctccggagtaagttttaaatcgcgagcgccaa 260
Query: 61 gcgcggtaaccgccgcgcgacgtcactggggcgtggcctttggtgcgcctgcgcaggccg 120
||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||
Sbjct: 261 gcgcggtaaccgccgcgtgacgtcactggggcgtggtctttggtgcgcctgcgcaggccg 320
Query: 121 cctaggcggctg----atcagagtggccccggaaacttggacagttttgagtctacgcgc 176
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cctaggcggctggctgatcagagtggccccggaaacttggacagttttgagtctacgcgc 380
Query: 177 gagtgaactaggtgcagcggtgacccagctgaagacgtttggaaacattctggcgccgag 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gagtgaactaggtgcagcggtgacccagctgaagacgtttggaaacattctggcgccgag 440
Query: 237 cgctgggcgcggagtaggatgtgtggatctgggcagg-------ttttttttgtgctttc 289
||||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct: 441 cgctgggcgcggagtaggatgtgtggatctgggcaggcgaaggct-------gtgctttc 493
Query: 290 ctagaatctggattgtaacgg 310
|||||||||||||||||||||
Sbjct: 494 ctagaatctggattgtaacgg 514
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 313
Length of database: 717
Length adjustment: 9
Effective length of query: 304
Effective length of database: 708
Effective search space: 215232
Effective search space used: 215232
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no218_d14.g1 MSMg01no218_d14.g1 CHROMAT_FILE:
MSMg01no218_d14.g1 PHD_FILE: MSMg01no218_d14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:46:10 2005
(280 letters)
>mm_chr2_127117961_127118640
Length = 680
Score = 518 bits (268), Expect = e-151
Identities = 277/280 (98%)
Strand = Plus / Minus
Query: 1 tataaaattcagaaattatttactttaaagatttatttatttaaatacctatttttaagg 60
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 485 tataaaattcagaaattatttactttaaagatttatttatttaaatatttatttttaagg 426
Query: 61 acttacattttctagacatctttgaaacaagcaggaagtgagactagggctcacaatgta 120
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 425 acttacattttctagacatctttgaaacaagcaggaagtgagactaaggctcacaatgta 366
Query: 121 tcaaacaagtgccagctcattctaatgcatacctccatcccagtttcttattttatgtct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 tcaaacaagtgccagctcattctaatgcatacctccatcccagtttcttattttatgtct 306
Query: 181 gaggatttgacttgtatgctctgggattaatggtgtgtgccatcactgcctagcgcagtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 gaggatttgacttgtatgctctgggattaatggtgtgtgccatcactgcctagcgcagtg 246
Query: 241 ctctgaatcactgagccgtctctccagcccacataccata 280
||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 ctctgaatcactgagccgtctctccagcccacataccata 206
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 280
Length of database: 680
Length adjustment: 9
Effective length of query: 271
Effective length of database: 671
Effective search space: 181841
Effective search space used: 181841
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
