Query= MSMg01no231_d03.b1 MSMg01no231_d03.b1 CHROMAT_FILE:
MSMg01no231_d03.b1 PHD_FILE: MSMg01no231_d03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:47:25 2005
(331 letters)
>mm_chr2_87515312_87516042
Length = 731
Score = 619 bits (320), Expect = 0.0
Identities = 326/328 (99%)
Strand = Plus / Minus
Query: 4 ggaattctctggataatttgtgtaacacgcttgtttatgctggtcagtgttatgcttttt 63
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 531 ggaattctctggataatttgtgtaacacgcctgtttatgctggtcagtgttatgcttttt 472
Query: 64 gtatagaagatttatacctacgataatttactaaatgtaaactaaccattttaaaacaaa 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 gtatagaagatttatacctacgataatttactaaatgtaaactaaccattttaaaacaaa 412
Query: 124 tgtaaatagatgcactattatgaattgtagcatagttagcatgggtatcctgaaatgcac 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 tgtaaatagatgcactattatgaattgtagcatagttagcatgggtatcctgaaatgcac 352
Query: 184 tataccttacaaagtggctattcagggacttttctccacagatgcaatgctgtactttgt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 tataccttacaaagtggctattcagggacttttctccacagatgcaatgctgtactttgt 292
Query: 244 cagggcaattatgtaatttagtgtgctcttaataattgtgtagcatgacatataattata 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 cagggcaattatgtaatttagtgtgctcttaataattgtgtagcatgacatataattata 232
Query: 304 aacccaggatttataatgtcccttttca 331
|||||||||||||||||| |||||||||
Sbjct: 231 aacccaggatttataatgccccttttca 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 331
Length of database: 731
Length adjustment: 9
Effective length of query: 322
Effective length of database: 722
Effective search space: 232484
Effective search space used: 232484
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no231_d03.g1 MSMg01no231_d03.g1 CHROMAT_FILE:
MSMg01no231_d03.g1 PHD_FILE: MSMg01no231_d03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:47:25 2005
(293 letters)
>mm_chr2_87358148_87358840
Length = 693
Score = 460 bits (238), Expect = e-134
Identities = 238/238 (100%)
Strand = Plus / Plus
Query: 55 tgtctcgaaaaaacaaaaaccaaaaaccaaccaaccaaacaacaacaacaacaaatctat 114
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 tgtctcgaaaaaacaaaaaccaaaaaccaaccaaccaaacaacaacaacaacaaatctat 314
Query: 115 tgcaccgccggaagtttctatccgtggttcttcggagagagataatttgaggagtgggct 174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 tgcaccgccggaagtttctatccgtggttcttcggagagagataatttgaggagtgggct 374
Query: 175 acagctggaggactcaggtacctcatccctcaggtgctacctcatccctcaggagtgatg 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 acagctggaggactcaggtacctcatccctcaggtgctacctcatccctcaggagtgatg 434
Query: 235 gctacgggcacagatgtatgtatcccagcacttgggaggcagaggcaggcggctttct 292
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 gctacgggcacagatgtatgtatcccagcacttgggaggcagaggcaggcggctttct 492
Score = 72.3 bits (37), Expect = 3e-17
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 256 atcccagcacttgggaggcagaggcaggcggctttct 292
|||||||||||||||||||||||||||||||||||||
Sbjct: 153 atcccagcacttgggaggcagaggcaggcggctttct 189
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 2
Length of query: 293
Length of database: 693
Length adjustment: 9
Effective length of query: 284
Effective length of database: 684
Effective search space: 194256
Effective search space used: 194256
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
