Query= MSMg01no232_a14.b1 MSMg01no232_a14.b1 CHROMAT_FILE:
MSMg01no232_a14.b1 PHD_FILE: MSMg01no232_a14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:48:26 2005
(232 letters)
>mm_chr2_109573090_109573721
Length = 632
Score = 414 bits (214), Expect = e-120
Identities = 226/234 (96%), Gaps = 8/234 (3%)
Strand = Plus / Plus
Query: 1 tcctgtcgcatcttaaacatccattccatccctgatcacagaaaactctcgaataccata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcctgtcgcatcttaaacatccattccatccctgatcacagaaaactctcgaataccata 260
Query: 61 aacattcctaacacctgcatagagtaactcacatcacaaaatttatgatggattggtcgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aacattcctaacacctgcatagagtaactcacatcacaaaatttatgatggattggtcgc 320
Query: 121 accaatacaaagaaactaagacacaaaggaaatttctgccaaagttctcagtgtttatga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 accaatacaaagaaactaagacacaaaggaaatttctgccaaagttctcagtgtttatga 380
Query: 181 gtaatggagca----tttttagatttcatgtagcctgcatctgcagccactatc 230
||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 381 gtaatggagcagggct----agatttcatgtagcctgcatctgcagccactatc 430
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 232
Length of database: 632
Length adjustment: 9
Effective length of query: 223
Effective length of database: 623
Effective search space: 138929
Effective search space used: 138929
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no232_a14.g1 MSMg01no232_a14.g1 CHROMAT_FILE:
MSMg01no232_a14.g1 PHD_FILE: MSMg01no232_a14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:48:26 2005
(579 letters)
>mm_chr2_109670760_109671738
Length = 979
Score = 837 bits (433), Expect = 0.0
Identities = 445/449 (99%)
Strand = Plus / Minus
Query: 131 gccagggttagtttgaagccaagcagagtgagaggccgagagaagccagattgaatcact 190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 979 gccagggttagtttgaagccaagcagagtgagaggccgagagaagccagattgaatcact 920
Query: 191 cagcttggagagaattttgagccagaacagatagttaaaccagccagccagagttcagaa 250
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 919 cagcttggagagacttttgagccagaacagatagttaaaccagccagccagagttcagaa 860
Query: 251 agagctagaaaggataagtttattcagcggcaagtccccaagattaccgttatatcagac 310
|||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||
Sbjct: 859 agagctagaaaggataagtttattcagcggtaagtccccaagattacagttatatcagac 800
Query: 311 aaataaaagttacagttacagtcagcactgctgcttcttcatttgggagtattagaacag 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 aaataaaagttacagttacagtcagcactgctgcttcttcatttgggagtattagaacag 740
Query: 371 agctctttgtgtatggccattgaggatggaagttagctttgccagtgccccaagcttggc 430
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 agctctttgtgtatggccattgaggatggaagttagctttgccagtgccccaagcttggc 680
Query: 431 gtcactaccactatcatcttccatacttctggatccacaactatactgatagaccaagag 490
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 gtcactaccactatcatcttccatacttctggatccacaactatactgatagaccaagag 620
Query: 491 tcaacacagatgtttgtggaaagcaaagccttactcttactatccaccttccttcgtctt 550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 tcaacacagatgtttgtggaaagcaaagccttactcttactatccaccttccttcgtctt 560
Query: 551 cctttgtataaggaaatgtcactcttaac 579
|||||||||||| ||||||||||||||||
Sbjct: 559 cctttgtataagaaaatgtcactcttaac 531
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 579
Length of database: 979
Length adjustment: 10
Effective length of query: 569
Effective length of database: 969
Effective search space: 551361
Effective search space used: 551361
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
