Query= MSMg01no232_n05.b1 MSMg01no232_n05.b1 CHROMAT_FILE:
MSMg01no232_n05.b1 PHD_FILE: MSMg01no232_n05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:49:24 2005
(319 letters)
>mm_chr2_68709167_68709886
Length = 720
Score = 547 bits (283), Expect = e-160
Identities = 308/317 (97%), Gaps = 3/317 (0%)
Strand = Plus / Plus
Query: 5 gaattctctggagttagttgtcctcaactgaaaaatgggggtagaggtgcctgctttgta 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctctggagtcagttgtcctcaactgaaaaatgggggtagaggtgcctgctttgta 264
Query: 65 gttctgaatgtggcacccaattaaaactacacatcgtgtcattcggatacggcagtgtag 124
|||||||| | || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gttctgaaagggg-acccaattaaaactacacatcgtgtcattcggatacggcagtgtag 323
Query: 125 ggtttagcacctcctgggaagtaatgttcagtaatggaattt--agcctgttagtgtggg 182
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 324 ggtttagcacctcctgggaagtaatgttcagtaatggaatttttagcctgttagtgtggg 383
Query: 183 gggcatgggagggtgctgcggtgcaggctatgaggtccaggtatgtacttgaccctggga 242
|||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||
Sbjct: 384 gggcatgggagggtgctgtggtgcaggctatgaggtccagttatgtacttgaccctggga 443
Query: 243 ctggaagattgaaatggttgagtaaatatttagtgttgggacttgaagcactgtcttcag 302
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ctggaagattgaattggttgagtaaatatttagtgttgggacttgaagcactgtcttcag 503
Query: 303 cagtgcctgcctggtta 319
|||||||||||||||||
Sbjct: 504 cagtgcctgcctggtta 520
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 720
Length adjustment: 9
Effective length of query: 310
Effective length of database: 711
Effective search space: 220410
Effective search space used: 220410
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no232_n05.g1 MSMg01no232_n05.g1 CHROMAT_FILE:
MSMg01no232_n05.g1 PHD_FILE: MSMg01no232_n05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:49:24 2005
(267 letters)
>mm_chr2_68846106_68846772
Length = 667
Score = 493 bits (255), Expect = e-144
Identities = 264/267 (98%)
Strand = Plus / Minus
Query: 1 ttcatcaaccaggtcagctattacaaagcaggaattatctgaactgctacctttttggaa 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 318 ttcatcaaccaggtcagctattacaaagcaggaattatctgaactgctaactttttggaa 259
Query: 61 agctgccttttaacttttctttggctcagtcaaagaacttaaaacatggtcccagttcgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 agctgccttttaacttttctttggctcagtcaaagaacttaaaacatggtcccagttcgg 199
Query: 121 cctcaggcacatgaatttacccttctgaaattggttttcttacccaaaatgagaaaattt 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 198 cctcaggcacatgaatttacccttctgaaattggttttcttacccaaaatgagaaatttt 139
Query: 181 ggacagttgatctttaaggccccttctctcaatgctaataatataagccatgtacacatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 ggacagttgatctttaaggccccttctctcaatgctaataatataagccatgtacacatt 79
Query: 241 tttaggggagggagggagggagggagg 267
||||||||||||||||||| |||||||
Sbjct: 78 tttaggggagggagggaggaagggagg 52
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 267
Length of database: 667
Length adjustment: 9
Effective length of query: 258
Effective length of database: 658
Effective search space: 169764
Effective search space used: 169764
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
