Query= MSMg01no233_e09.b1 MSMg01no233_e09.b1 CHROMAT_FILE:
MSMg01no233_e09.b1 PHD_FILE: MSMg01no233_e09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:49:57 2005
(682 letters)
>mm_chr2_144424884_144425965
Length = 1082
Score = 1266 bits (655), Expect = 0.0
Identities = 673/679 (99%)
Strand = Plus / Minus
Query: 4 ggaattcgctgtgtggtcagaccttgcgactccgccggtggctcctcgaccggcgccctc 63
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 882 ggaatttgctgtgtggtcagaccttgcgactccgccggtggctcctcgaccggcgccctc 823
Query: 64 taccggcaacaccggaagagctccgtgaggacccattccacagagctgcgtcccgcccac 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 822 taccggcaacaccggaagagctccgtgaggacccattccacagagctgcgtcccgcccac 763
Query: 124 gtcggccacacctatccaattggccccgcccatgtcaatcaccctcacctgtcacctatg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 762 gtcggccacacctatccaattggccccgcccatgtcaatcaccctcacctgtcacctatg 703
Query: 184 cataacctagtccatttgtggtaggccccgccctatccacccctgaactccttcttaagc 243
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 702 cataacctagtccatttgtggtaggcgccgccctatccacccctgaactccttcttaagc 643
Query: 244 actatagtcccaaactgccagcctagtctccactatgtccagacactcattaatttctgc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 actatagtcccaaactgccagcctagtctccactatgtccagacactcattaatttctgc 583
Query: 304 tccagtttctttctctttcagttttacccttaagtttttttcctgcttttctccctcttt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 tccagtttctttctctttcagttttacccttaagtttttttcctgcttttctccctcttt 523
Query: 364 tccaatcctccggtcacagattttccaaaatcttcacttgttctgtagcctcagcagcaa 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 tccaatcctccggtcacagattttccaaaatcttcacttgttctgtagcctcagcagcaa 463
Query: 424 tcctgttgctaaaaacaaaaggacctgctggtaatatagccatttaactacataactatt 483
|||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||
Sbjct: 462 tcctgttgctaaaaacaaaaggacctgctgctaacatagccatttaactacataactatt 403
Query: 484 gatttaccttagacacaatagttaataggtctatcagtctagaattctaattccttccta 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 gatttaccttagacacaatagttaataggtctatcagtctagaattctaattccttccta 343
Query: 544 atacaaatctaatacttagccctatcatagggttgttaggaaatttgaatgggctgtaaa 603
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 342 atacaaatctaatacttagccctatcatagggttgttaggaaatttggatgggctgtaaa 283
Query: 604 gatgcttagatggctgcaaagaactgtatagctattactgtaccaagttttcatcactaa 663
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 282 gatgcttagatggctgcaaagaactgtatagctattactgtactaagttttcatcactaa 223
Query: 664 aaaataacatcttcatagt 682
|||||||||||||||||||
Sbjct: 222 aaaataacatcttcatagt 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 682
Length of database: 1082
Length adjustment: 10
Effective length of query: 672
Effective length of database: 1072
Effective search space: 720384
Effective search space used: 720384
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no233_e09.g1 MSMg01no233_e09.g1 CHROMAT_FILE:
MSMg01no233_e09.g1 PHD_FILE: MSMg01no233_e09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:49:57 2005
(164 letters)
>mm_chr2_144381916_144382483
Length = 568
Score = 298 bits (154), Expect = 1e-85
Identities = 163/168 (97%), Gaps = 4/168 (2%)
Strand = Plus / Plus
Query: 1 ggaggagggccgaagccagacaggccgaggcaaggtgggcttgcttatgggaagaatc-- 58
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ggaggagggccgaagccagacaggccgaggcaaggtgggcttgcttatgggaagaatcag 260
Query: 59 --agagttgatgacccagaagctggctcagagtgactcgtccgcgccgtgcctgagagcc 116
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 261 agagagttgatgacccagaagccggctcagagtgactcgtccgcgccgtgcctgagagcc 320
Query: 117 gacggccggtttctgactccttagccctcggaattggggtgttggtgg 164
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gacggccggtttctgactccttagccctcggaattggggtgttggtgg 368
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 164
Length of database: 568
Length adjustment: 8
Effective length of query: 156
Effective length of database: 560
Effective search space: 87360
Effective search space used: 87360
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
