Query= MSMg01no233_j22.b1 MSMg01no233_j22.b1 CHROMAT_FILE:
MSMg01no233_j22.b1 PHD_FILE: MSMg01no233_j22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:50:21 2005
(331 letters)
>mm_chr2_166528254_166528983
Length = 730
Score = 594 bits (307), Expect = e-174
Identities = 322/327 (98%), Gaps = 1/327 (0%)
Strand = Plus / Plus
Query: 5 gaattcatgaataaaagctctcggtgaaggcactctgctctgtcctccaggcagaagaca 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcatgaataaaagctctcggtgaaggcactctgctctgtcctccaggcagaagaca 264
Query: 65 cccaggccccagaggctgccagccacctaccaacaccggtctatgacaccctggcctcct 124
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 265 cccaggccccagaggctgccagccacctaccaacaccagtctatgacaccctggcctcct 324
Query: 125 ccgcccagagtcaagggagcactgtcagctccacactggggaaaggaaccagaccactga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ccgcccagagtcaagggagcactgtcagctccacactggggaaaggaaccagaccactga 384
Query: 185 caaacacagattgagtggcctgaccacaagacaaaggaagagccctgctgcccgagaaag 244
||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 caaacacagattgagcg-cctgaccacaagacaaaggaagagccctgctgcccgagaaag 443
Query: 245 tgaagaaacagatgaaacttcccgtgctccggtacagggaggatgaaggtccctcctccc 304
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 444 tgaagaaacagatgaaacttcccgtgctccggcacagggaggatgaaggtccctcctccc 503
Query: 305 caacttccagggacactgtgaacctgc 331
|||||||||||||||| ||||||||||
Sbjct: 504 caacttccagggacaccgtgaacctgc 530
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 331
Length of database: 730
Length adjustment: 9
Effective length of query: 322
Effective length of database: 721
Effective search space: 232162
Effective search space used: 232162
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no233_j22.g1 MSMg01no233_j22.g1 CHROMAT_FILE:
MSMg01no233_j22.g1 PHD_FILE: MSMg01no233_j22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:50:22 2005
(286 letters)
>mm_chr2_166687266_166687952
Length = 687
Score = 414 bits (214), Expect = e-120
Identities = 279/322 (86%), Gaps = 38/322 (11%)
Strand = Plus / Minus
Query: 1 ccatggtggaagaagaactgactctggcaagttgtgctcct-accttcacacggcaggct 59
|||||||||||||||||||||||||||||||||||||| || |||| |||| ||||||||
Sbjct: 667 ccatggtggaagaagaactgactctggcaagttgtgct-ctgacctccaca-ggcaggct 610
Query: 60 ggggcaaacacaaacacacataccctgttttaaaagttacattacttatttaac------ 113
||||||||| |||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 609 ggggcaaacgcaaacacacataccctgttttaaaagttacattactcatttaacatgtat 550
Query: 114 ------------gtgtgtgtgtgtgtgtgtgtgtgtgtgtgta----------------t 145
||||||||||||||||||||||||||||||| |
Sbjct: 549 gtgtatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatgtgtgtgtgtgtgtgt 490
Query: 146 gtcttttcttgcacttcatctcaccttgaagccagtagggtgagctgtcaccctaaagct 205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 gtcttttcttgcacttcatctcaccttgaagccagtagggtgagctgtcaccctaaagct 430
Query: 206 ggcctgca-agctgggagaaggaccagtgaggaagggcatttcctccaagcccgaggcct 264
|||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 429 ggcctgcagggctgggagaaggaccagtgaggaaggacatttcctccaagcccgaggcct 370
Query: 265 gatatcaaccctggggcccaca 286
||||||||||||||||||||||
Sbjct: 369 gatatcaaccctggggcccaca 348
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 10
Number of successful extensions: 10
Number of sequences better than 10.0: 1
Number of HSP's gapped: 7
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 687
Length adjustment: 9
Effective length of query: 277
Effective length of database: 678
Effective search space: 187806
Effective search space used: 187806
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
