Query= MSMg01no234_b24.b1 MSMg01no234_b24.b1 CHROMAT_FILE:
MSMg01no234_b24.b1 PHD_FILE: MSMg01no234_b24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:51:00 2005
(322 letters)
>mm_chr2_113484666_113485387
Length = 722
Score = 543 bits (281), Expect = e-159
Identities = 308/317 (97%), Gaps = 4/317 (1%)
Strand = Plus / Plus
Query: 5 gaattcaaagtcctatg-tccattgtcctcacttcttctggatgaagtaggagttgggga 63
||||||||||||||||| | |||| ||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaaagtcctatggtg-attgccctcacttcttctggatgaagtaggagttgggga 263
Query: 64 gaagcaagttgtttctctctttctgtatacccactttcatatccactg-tggatattccc 122
||||||||||| ||||||||||||||||||||||||||||||| || |||||||||||
Sbjct: 264 gaagcaagttgggcctctctttctgtatacccactttcatatcca-tggtggatattccc 322
Query: 123 tctccataggtcactggtttctttagggaaaactatcagtgcattaagttatatttcccc 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 tctccataggtcactggtttctttagggaaaactatcagtgcattaagttatatttcccc 382
Query: 183 ggggctgggttttattaacctatgaagttgtaataattatattcagctacaatctcctaa 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 ggggctgggttttattaacctatgaagttgtaataattatattcagctacaatctcctaa 442
Query: 243 tttgctattcctgtcatgacagtatatacacttttaagttaaaatttttaatgcagttat 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 tttgctattcctgtcatgacagtatatacacttttaagttaaaatttttaatgcagttat 502
Query: 303 ttcttttaaaaataatg 319
|||||||||||||||||
Sbjct: 503 ttcttttaaaaataatg 519
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 322
Length of database: 722
Length adjustment: 9
Effective length of query: 313
Effective length of database: 713
Effective search space: 223169
Effective search space used: 223169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no234_b24.g1 MSMg01no234_b24.g1 CHROMAT_FILE:
MSMg01no234_b24.g1 PHD_FILE: MSMg01no234_b24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:51:00 2005
(289 letters)
>mm_chr2_113662090_113662778
Length = 689
Score = 474 bits (245), Expect = e-138
Identities = 278/289 (96%)
Strand = Plus / Minus
Query: 1 atggaggacacttgcaccccctccacattgggggttcagacttcagtatcccttttaagg 60
|||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 566 atggaggacagttgcaccccctccacattgggggttcagacttcagtataatttttaagg 507
Query: 61 ggacataaacactgagtgcttattccagccagtgtacatctgtgggtacagggcctgaac 120
||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| |
Sbjct: 506 ggacataaacactgagtgcttattccagctagtgtccatctgtgggtacagggcctgagc 447
Query: 121 tagagcttcttgtgagttctgtagcctaactcattcttccgaacaccaagtcccagctgt 180
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 tagagcttcttgtgagctctgtagcctaactcattcttccgaacaccaagtcccagctgt 387
Query: 181 gtgcagccttcatggagaagcagcatttaaaccatgcactcggcccatttctgtgaccgt 240
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 386 gtgcagccttcatggagaagcagcatttaaaccatgcgctcggcccatttctgtgaccgt 327
Query: 241 aacctgaatgtaacaagtggggacagtggactttgctgcctctaaattc 289
|||||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 326 aacctgaatggaacaagtggggacagtgaactttgctgcctctaaattc 278
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
