Query= MSMg01no260_c16.b1 MSMg01no260_c16.b1 CHROMAT_FILE:
MSMg01no260_c16.b1 PHD_FILE: MSMg01no260_c16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:56:11 2005
(295 letters)
>mm_chr2_173682675_173683369
Length = 695
Score = 507 bits (262), Expect = e-148
Identities = 277/282 (98%)
Strand = Plus / Minus
Query: 14 gtttgagtttattatacaggttaaacctcaaagaaaaatgcgtgtggggagagccaagtg 73
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 666 gtttgagtttattatacaggttaaacctcaaagaaaaatgtgtgtggggagagccaagtg 607
Query: 74 gtatctggcatagcaaatggaggatgaccagctcttttaggtcttgtatgtgtgtggtgt 133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 gtatctggcatagcaaatggaggatgaccagctcttttaggtcttgtatgtgtgtggtgt 547
Query: 134 gtctatgtatgcatgcatacatgttcgcatgtgtgactgcaggtatgtgtgccagccaca 193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 gtctatgtatgcatgcatacatgttcgcatgtgtgactgcaggtatgtgtgccagccaca 487
Query: 194 cagatgaaggtcaaaaaacaacctctggtggtggtccttgacttctagcttgttttgaaa 253
|| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 486 catatgaaggtcaaaaaacaacctctggtggtggtccttgacttctaccttgttttgaaa 427
Query: 254 catagtcttcattgttttctgtgcacatcaagctatctagac 295
|| ||||||| |||||||||||||||||||||||||||||||
Sbjct: 426 cagagtcttcgttgttttctgtgcacatcaagctatctagac 385
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 295
Length of database: 695
Length adjustment: 9
Effective length of query: 286
Effective length of database: 686
Effective search space: 196196
Effective search space used: 196196
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no260_c16.g1 MSMg01no260_c16.g1 CHROMAT_FILE:
MSMg01no260_c16.g1 PHD_FILE: MSMg01no260_c16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:56:11 2005
(249 letters)
>mm_chr2_173530384_173531032
Length = 649
Score = 460 bits (238), Expect = e-134
Identities = 247/250 (98%), Gaps = 2/250 (0%)
Strand = Plus / Plus
Query: 1 tccagggcatttgtcctgttttatgtgcaaatgaaagtctgaaaaatattaaaaggatac 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 201 tccagggcatttgtcctgttttatgtgcaaatgaaagtctgaaaaatattagaaggatac 260
Query: 61 tacacttctcaggggcctcccttctgtatctcagaaggtgatgagcgagggacctgctgt 120
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 261 tacacttctcaggggcctcccttctgtatctcagaaggtgatgagcgagg-acctgctgt 319
Query: 121 gat-aagttcattagatgtgctgcgaagggcagatgaacagagcttggaatcgccgtatt 179
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gatgaagttcattagatgtgctgcgaagggcagatgaacagagcttggaatcgccgtatt 379
Query: 180 tctcagcccgtccttcagggcgctcttagcatggaggagagtgatttactctctggagct 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tctcagcccgtccttcagggcgctcttagcatggaggagagtgatttactctctggagct 439
Query: 240 aggacttcca 249
||||||||||
Sbjct: 440 aggacttcca 449
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 649
Length adjustment: 9
Effective length of query: 240
Effective length of database: 640
Effective search space: 153600
Effective search space used: 153600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
