CCTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTT

TGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXCTGGCGTACAGTCATGGTTTATAAATGT
ATATTGACTCAGGAACATCTAGAATGCATAATGAAAAGTCAGATATCCTC
TCTGTCCCTGTTTATGAAAGATTCCTGAGACTTAAAGGATAGACATGACG
TTGACATAGTATTTGACATCAGACTATGAGGAAATAAGGTGTCTGTTTGC
CCTTAATTTTTAACGTGGTACTGCTAATGAGATGGAATATTTATGTGAGT
ATTGTTGATTTATATTTTCAGGATAACCTAGGCATATATATATATTCTGT
TTTCACTTTAGTTGAGAAAAATTAATGCTCCTAAGTCTAAATATTACTCA
AGCCTACAGGTCAATGAGCAGGATTTTATCAGTCTTTCTAAATCATGTGT
TCAGTCAAAGTACCATGATATCTCAAGTTCAGCCAAAGTGCCATGATATC
TTCCCCAAAGTTCTGTGTGATTCACCTACATATTTAGTATCAGTTAAAAT
AAGTTATATATCAGGTGTTTACAGATCTCCAAGGAAAATGTATGTATGAA
ATATATTAAGCACATCTTCAAGATAATTAACTTAATGGACTCATAGTCTA
TAATAAGGGCTTTACAAATCTAGAATACAAGGCAATAGCTTGTGGTGTAA
AGCAAAGCCCGACTGAAGAAGGTTGAAGTTAACGCTGACTTCATAGTATC
TTCTTGTG

Query= MSMg01no260_n03.g1 MSMg01no260_n03.g1 CHROMAT_FILE:
MSMg01no260_n03.g1 PHD_FILE: MSMg01no260_n03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:57:02 2005
         (658 letters)



>mm_chr2_54869262_54870317
          Length = 1056

 Score = 1214 bits (628), Expect = 0.0
 Identities = 650/658 (98%), Gaps = 2/658 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   ctggcgtacagtcatggtttataaatgtatattgactcaggaacatctagaatgcataat 60
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 856 ctggcgtacagtcatggtttataaatgtatattgactcagaaacatctagaatgcataat 797

                                                                       
Query: 61  gaaaagtcagatatcctctctgtccctgtttatgaaagattcctgagacttaaaggatag 120
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 796 gaaaagtcagatatcctctctgcccctgtttatgaaagattcctgagacttaaaggatag 737

                                                                       
Query: 121 acatgacgttgacatagtatttgacatcagactatgaggaaataaggtgtctgtttgccc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 acatgacgttgacatagtatttgacatcagactatgaggaaataaggtgtctgtttgccc 677

                                                                       
Query: 181 ttaatttttaacgtggtactgctaatgagatggaatatttatgtgagtattgttgattta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 ttaatttttaacgtggtactgctaatgagatggaatatttatgtgagtattgttgattta 617

                                                                       
Query: 241 tattttcaggataacctaggcatatatatatattctgttttcactttagttgagaaaaat 300
           |||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||
Sbjct: 616 tattttcaggataacctaggc--atatatatattctgttttcactttagttgagagaaat 559

                                                                       
Query: 301 taatgctcctaagtctaaatattactcaagcctacaggtcaatgagcaggattttatcag 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 taatgctcctaagtctaaatattactcaagcctacaggtcaatgagcaggattttatcag 499

                                                                       
Query: 361 tctttctaaatcatgtgttcagtcaaagtaccatgatatctcaagttcagccaaagtgcc 420
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 498 tctttctaaatcatgtgttcagtcaaagtaccacgatatctcaagttcagccaaagtgcc 439

                                                                       
Query: 421 atgatatcttccccaaagttctgtgtgattcacctacatatttagtatcagttaaaataa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 atgatatcttccccaaagttctgtgtgattcacctacatatttagtatcagttaaaataa 379

                                                                       
Query: 481 gttatatatcaggtgtttacagatctccaaggaaaatgtatgtatgaaatatattaagca 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 gttatatatcaggtgtttacagatctccaaggaaaatgtatgtatgaaatatattaagca 319

                                                                       
Query: 541 catcttcaagataattaacttaatggactcatagtctataataagggctttacaaatcta 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 318 catcttcaagataattaacttaatggactcatagtctataataagggctttacaattcta 259

                                                                     
Query: 601 gaatacaaggcaatagcttgtggtgtaaagcaaagcccgactgaagaaggttgaagtt 658
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 gaatacaagacaatagcttgtggtgtaaagcaaagcccgactgaagaaggttgaagtt 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 658
Length of database: 1056
Length adjustment: 10
Effective length of query: 648
Effective length of database: 1046
Effective search space:   677808
Effective search space used:   677808
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)