Query= MSMg01no261_e12.b1 MSMg01no261_e12.b1 CHROMAT_FILE:
MSMg01no261_e12.b1 PHD_FILE: MSMg01no261_e12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:57:38 2005
(556 letters)
>mm_chr2_9275018_9275974
Length = 957
Score = 1038 bits (537), Expect = 0.0
Identities = 550/555 (99%), Gaps = 3/555 (0%)
Strand = Plus / Plus
Query: 4 ggaattcactat--tatacaattggtctttgtctgcatcattctgaaattgatcctttga 61
||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcactaaaatata-aattggtctttgtctgcatcattctgaaattgatcctttga 262
Query: 62 aagaaatattaaaagctttttataatgtatgaagtaaatagaagtatatttggcacaaag 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 aagaaatattaaaagctttttataatgtatgaagtaaatagaagtatatttggcacaaag 322
Query: 122 taggaaaaatgaacaaacacgtgtgtgaaaattgtgcagtcttattgaactggtcaaaat 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 taggaaaaatgaacaaacacgtgtgtgaaaattgtgcagtcttattgaactggtcaaaat 382
Query: 182 tactctggtccatctggtctattttatcatataattaaactgttaaatgcaagtacaaat 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 tactctggtccatctggtctattttatcatataattaaactgttaaatgcaagtacaaat 442
Query: 242 acatgcatctacatttttatttctcaaaactatatggacttgcttacttttgatctgtga 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 acatgcatctacatttttatttctcaaaactatatggacttgcttacttttgatctgtga 502
Query: 302 aaccagtaaatagaaaaagcctaattgatggtgcggtatgaattgataaggatattaact 361
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 503 aaccagtaaatagaaaaagcctaattgatggtgcggtgtgaattgataaggatattaact 562
Query: 362 ctctcaaataaatagttattaattataagtaagtattttctaatttaagtaagtctgtgt 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 ctctcaaataaatagttattaattataagtaagtattttctaatttaagtaagtctgtgt 622
Query: 422 tggaggttttaaattgactctgggcactcagttgctggctgtgtgttttccaatcttgca 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 tggaggttttaaattgactctgggcactcagttgctggctgtgtgttttccaatcttgca 682
Query: 482 aataaaagataaaaatgtaagagactcccaagacagaataagttcagcattaaagttgta 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 aataaaagataaaaatgtaagagactcccaagacagaataagttcagcattaaagttgta 742
Query: 542 gaaataatatttttt 556
|||||||||||||||
Sbjct: 743 gaaataatatttttt 757
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 556
Length of database: 957
Length adjustment: 10
Effective length of query: 546
Effective length of database: 947
Effective search space: 517062
Effective search space used: 517062
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no261_e12.g1 MSMg01no261_e12.g1 CHROMAT_FILE:
MSMg01no261_e12.g1 PHD_FILE: MSMg01no261_e12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:57:38 2005
(339 letters)
>mm_chr2_9441507_9442246
Length = 740
Score = 522 bits (270), Expect = e-152
Identities = 294/302 (97%), Gaps = 1/302 (0%)
Strand = Plus / Minus
Query: 1 agtacatacctttcagaagtagagatggattc-tttttttttttttcccatcctgccaaa 59
|||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||
Sbjct: 302 agtacatacctttcagaagtagagatggattctttttttttttttttccatcctgccaaa 243
Query: 60 caagaatggatagctgtatgctttttactttcttaagaagaaggggctggcaagatggct 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 caagaatggatagctgtatgctttttactttcttaagaagaaggggctggcaagatggct 183
Query: 120 cagtgggtagaatgctttctgctcaagcaggaaaccctttctgtctccaacacccacatg 179
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 cagtgggtagagtgctttctgctcaagcaggaaaccctttctgtctccaacacccacatg 123
Query: 180 aaaagccacgcgagtgatgtatacctgtttctccagtgctgggaagcataggcaggagga 239
||||| || ||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 122 aaaagtcaagcgagtgatgtatacctgtttctccagtgctgggaagcagaggcaggagga 63
Query: 240 tccctgtagtttgctggcagcttatacaaataggggagtcccaggagtctgtcttaaaaa 299
|||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 62 tccctggagtttgctggcagcttagacaaataggggagtcccaggagtctgtcttaaaaa 3
Query: 300 ta 301
||
Sbjct: 2 ta 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 339
Length of database: 740
Length adjustment: 9
Effective length of query: 330
Effective length of database: 731
Effective search space: 241230
Effective search space used: 241230
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
