CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCGAGAATCCGCGGA
ATTCATGAACATGATTACGAAACATCATTTGACTGAGGAAGTGGATATGG
AAGCAGAAGAGCATTCTACCGACAACAATGTGAAATGTAGAGAAAGAAAA
AATATCAGTAGAAAACTGATGGAAAGGTATAAGACATTTAGACCCTGGTT
ATTCAGAAAGAATTACGAAACTGCTGACTTCCAACCAAGTCTTGCAATTA
AATTAGCACACCACCCTGCATGGGAAAATGGGCACAAACCAAGCTGTGTT
CTTAGCCTAAGCAATGGCATAGGAATTTGAATGCATTGTGGTTGGCAGAA
ACCAGGCACCTGATGGGACTGGAGATTAGTGTATAAGATGGAGCTGGCAA
TGAGAAGACTCAACTATCACCGTGTTTAAGCTCCACATTCTTCCTTGGCC
TTGGGTTCTGAGAACGGATGTCACCCATCCAAATCATTTCTGGAATCAAC
TTTTCTTGTTTACAAGGTGTTTCAGGATTACACTCAAATCTCCATAAATT
CTTCTTGGAATCTAATTAGGAAGAGGTCTGCTTCACAGAGGAGAAAATTA
AGATTGAGAGAAACACATGGGCGCTCAGTTCAGTAGCATTTCTACTTTAT
AACAGCAGCAGTCTCTGGCTCATTATGCCCATGTATTCTTCAAGCAATAT
GCTAGGCAGATGTATTTTGACACTTCTGAAGTCAAAA

NTTCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTTTGTTTAGCTCTGTACCCCATTT
TTCAATAGTGTTATTTGATTCTCAGGAGACTACCTTCTTGGGTTCTTTGT
ATATATTGGATATTAGCCCTCTATTGGATGTAGGATTGGTAAAGAACTTT
TCCCAATCTGTTGGTTGCCACTTTGTCCTATTGACAGTGTCCTTTGCCTT
ACAGAAACATTGCAATTTTAAGAAGTCCTATTTGTCAATTCTTGATCTTA
GAGCATAAGCCATTAGTGTTCTGTTCAGGAACTTTTCCTCTATGCCCATG
TATTCGAGGCTCTTTCTCACTTTCTCCTCTATTAGTTGCAGTGTATCTGG
TTTTTTGTTGAGGTCCTGGATCTACTTGGACTTGAGCTTTGTACAAGGAG
ATACGAATGGATCAATTTGCATTCTTCTACTTGCTGACCACCAGTTGAAC
CAGCATCATTTGTTGAAAGTGTTGTCTTTTTTTCACTGGATGGTTTTAGC
TCCCTTGTCAAAGATCAATTGACCACAGGTGTGTTGTTGATTTCTGTGTT
TTCAATACTGCTACATTGATCTATGTACCTGTCTCTGTACTAGTATCATA
CAGTTTTTATCACTATTTCTCCTTAGTATGGCTTGAGGTCAGGGATGGTG
AATTG

Query= MSMg01no261_f23.b1 MSMg01no261_f23.b1 CHROMAT_FILE:
MSMg01no261_f23.b1 PHD_FILE: MSMg01no261_f23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:57:45 2005
         (664 letters)



>mm_chr2_123599712_123600776
          Length = 1065

 Score = 1247 bits (645), Expect = 0.0
 Identities = 660/665 (99%), Gaps = 1/665 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   aacatcatttgactgaggaagtggatatggaagcagaagagcattctaccgacaacaatg 60
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 865 aacatcatttgactgaggaagtggatatggaagcagaagagcattctaccaacaagaatg 806

                                                                       
Query: 61  tgaaatgtagagaaag-aaaaaatatcagtagaaaactgatggaaaggtataagacattt 119
           |||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 805 tgaaatgtagagaaagaaaaaaatatcagtagaaaactgatggaaaggcataagacattt 746

                                                                       
Query: 120 agaccctggttattcagaaagaattacgaaactgctgacttccaaccaagtcttgcaatt 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 agaccctggttattcagaaagaattacgaaactgctgacttccaaccaagtcttgcaatt 686

                                                                       
Query: 180 aaattagcacaccaccctgcatgggaaaatgggcacaaaccaagctgtgttcttagccta 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 aaattagcacaccaccctgcatgggaaaatgggcacaaaccaagctgtgttcttagccta 626

                                                                       
Query: 240 agcaatggcataggaatttgaatgcattgtggttggcagaaaccaggcacctgatgggac 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 agcaatggcataggaatttgaatgcattgtggttggcagaaaccaggcacctgatgggac 566

                                                                       
Query: 300 tggagattagtgtataagatggagctggcaatgagaagactcaactatcaccgtgtttaa 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tggagattagtgtataagatggagctggcaatgagaagactcaactatcaccgtgtttaa 506

                                                                       
Query: 360 gctccacattcttccttggccttgggttctgagaacggatgtcacccatccaaatcattt 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gctccacattcttccttggccttgggttctgagaacggatgtcacccatccaaatcattt 446

                                                                       
Query: 420 ctggaatcaacttttcttgtttacaaggtgtttcaggattacactcaaatctccataaat 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ctggaatcaacttttcttgtttacaaggtgtttcaggattacactcaaatctccataaat 386

                                                                       
Query: 480 tcttcttggaatctaattaggaagaggtctgcttcacagaggagaaaattaagattgaga 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tcttcttggaatctaattaggaagaggtctgcttcacagaggagaaaattaagattgaga 326

                                                                       
Query: 540 gaaacacatgggcgctcagttcagtagcatttctactttataacagcagcagtctctggc 599
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 325 gaaacacatgggcgctcagttcagtagcatttctactttataacagcagcagtctcaggc 266

                                                                       
Query: 600 tcattatgcccatgtattcttcaagcaatatgctaggcagatgtattttgacacttctga 659
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tcattatgcccatgtattcttcaagcaatatgctaggcagatgtattttgacacttctga 206

                
Query: 660 agtca 664
           |||||
Sbjct: 205 agtca 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 664
Length of database: 1065
Length adjustment: 10
Effective length of query: 654
Effective length of database: 1055
Effective search space:   689970
Effective search space used:   689970
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)