Query= MSMg01no261_h16.b1 MSMg01no261_h16.b1 CHROMAT_FILE:
MSMg01no261_h16.b1 PHD_FILE: MSMg01no261_h16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:57:53 2005
(542 letters)
>mm_chr2_11006968_11007908
Length = 941
Score = 932 bits (482), Expect = 0.0
Identities = 527/542 (97%), Gaps = 1/542 (0%)
Strand = Plus / Minus
Query: 1 catgttttcttaatccctcggttgatagacatttaaattggtttcaagacttggctgtca 60
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 741 catgttttcttaatccctcggttgatagacatttcaattggtttcaagacttggctgtcg 682
Query: 61 tggagattgtcatcttaactatttcccatttctctcacttgaaaataacgcctgccagtt 120
|||||| ||||||||||||||||||||||||||||||||||| ||||||| | |||||||
Sbjct: 681 tggagaatgtcatcttaactatttcccatttctctcacttgagaataacgtcggccagtt 622
Query: 121 cggaagagtgcacctctccaggctccgcgctttactttgttagcccatgattcagtgacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cggaagagtgcacctctccaggctccgcgctttactttgttagcccatgattcagtgacc 562
Query: 181 ctccccatggccatgaatgattatcagttgatgtttcagtcgtacagcgttgtgttgacc 240
||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct: 561 ctccccatggccatgaatgattatcagtttatgtttcagtcgtacagggttgtgttgacc 502
Query: 241 acactctcactgaaatgtgactttttgttgatgtagagttgatgttggtattgacaaggg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 acactctcactgaaatgtgactttttgttgatgtagagttgatgttggtattgacaaggg 442
Query: 301 tcatgaggaaagtgacgatttgttcatggaatcaccatggacacaatattaaccactact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcatgaggaaagtgacgatttgttcatggaatcaccatggacacaatattaaccactact 382
Query: 361 atgacaactaaaatttatgcctgaccagttttcatgtgactgacctccatttgaagtaca 420
|||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||
Sbjct: 381 atgacaactaaaatttatgcctgaccagttttcatgtgac-aacctccgtttgaagtaca 323
Query: 421 cagtcttttaaggcacgggatagtgcccctctgctacgaagaaatggacactgaatggtt 480
||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 322 cagtcttttaaggtacgggatactgcccctctgctacgaagaaatggacactgaatggtt 263
Query: 481 aaacaacattgtgaagcagagaaaggcacatctactataataacatctgtacaggtgaaa 540
||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 262 aaacaacattgtgaaacagagaaaggcacatctacaataataacatctgtacaggtgaaa 203
Query: 541 gc 542
||
Sbjct: 202 gc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 542
Length of database: 941
Length adjustment: 10
Effective length of query: 532
Effective length of database: 931
Effective search space: 495292
Effective search space used: 495292
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no261_h16.g1 MSMg01no261_h16.g1 CHROMAT_FILE:
MSMg01no261_h16.g1 PHD_FILE: MSMg01no261_h16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:57:53 2005
(549 letters)
>mm_chr2_10800072_10801019
Length = 948
Score = 1015 bits (525), Expect = 0.0
Identities = 543/549 (98%), Gaps = 1/549 (0%)
Strand = Plus / Plus
Query: 1 tgtggaagctaatctcattcaaaccaccacagtcccaatagaaacctgtacacacactca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgtggaagctaatctcattcaaaccaccacagtcccaatagaaacctgtacacacactca 260
Query: 61 ggatagttaaaatgaagataggagagagaccagtgctcacataggaagagaggaagatga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggatagttaaaatgaagataggagagagaccagtgctcacataggaagagaggaagatga 320
Query: 121 agaaagagaaaaagaagcacattgctaccaaacacacaatattctgagtttcactgaaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agaaagagaaaaagaagcacattgctaccaaacacacaatattctgagtttcactgaaga 380
Query: 181 gcaaaatagaacattaagagggttccttacaaagtagggtctgatgaaagatacattaag 240
| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 381 gtaaaatagaacattaagagggttccttacaaagtagggtgtgatgaaagatacattaag 440
Query: 241 aacataaaatagcatagcgatttcttggtatctattttccaggggaaaatacactttgta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aacataaaatagcatagcgatttcttggtatctattttccaggggaaaatacactttgta 500
Query: 301 cattgtttattgtgataggttctacaatgaatttcacagaacaaagaaagacagattgga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cattgtttattgtgataggttctacaatgaatttcacagaacaaagaaagacagattgga 560
Query: 361 aataaaccatgtctggagactgaagctatcaaaaaatgttctttttttttttcttatgtg 420
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 561 aataaaccatgtctggagactgaagctatcaaaaaatgttctttttttttt-cttatgtg 619
Query: 421 tacttcccagtttatgtccagtgagtatggacaacttcttgagggggaaaaaaagaactt 480
||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 620 tacttcccagtttatgtccagtgagtatggatgacttcttgaggggggaaaaaagaactt 679
Query: 481 tactttaggataataaaaaactgtagtttataacataatattttctaatagtgatgtcag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 tactttaggataataaaaaactgtagtttataacataatattttctaatagtgatgtcag 739
Query: 541 atgaaagct 549
|||||||||
Sbjct: 740 atgaaagct 748
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 549
Length of database: 948
Length adjustment: 10
Effective length of query: 539
Effective length of database: 938
Effective search space: 505582
Effective search space used: 505582
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
