NNNCCTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCTCACCTGATGTACACCGAATGGCAGAGAAGCACCTGAAAA
AATGTTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTG
AGATTCCACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGA
CAGCAGATGCTGGCGTGGATGTGGAGAAAGAGGAACACTCCTCCATTGTT
GGTGGGATTGCAGGCTTGTACAACCACTCTGGAAATCAGTCTGGCGGTTC
CTCAGAAAATTGGACATAGTACTACCGGAGGATCCAGCAATACCTCTCCT
GGGCATATATCCAGAAGATGCCCCAACTGGTAAGAAGGACACATGCTCCA
CTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAACCC
AGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATCTACAC
AATGGAGTACTACTCCGCTATTAAAAAGAATGAATTTATGAAATTCCTAG
CCAAATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACACATTCA
CAAAGGAACTCACACAATATGTACTCACTGATAAGTGGATATTAGCCCCA
AACCTAGGATTCCCAAGATATAAGGTACAATTTGCTAAACACATGAAACT
CAAGAAGAATGAAGACTGAA

NNCCACAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAAGTGGGGAAGTCACCA
ATTGCTATCCATCAGTAGCAGATAGAGGCATCACCAGAGGCTAAAGTTAG
TGAGTTCCTTCAGAGAAACTTTGCTTGCTCTGGACTTCTTCCTCAATGTT
TGGATTAGTATTTACCATGTTCATAATCTCTTTTAATGCTGGAGAACTAC
TTTAGTTTTCTTTTCCTTGTTTTTTATTATTTTATTTTTCATTAACTTAT
TTTTTTTTCTTGTCAAAATAATCCGTACATTTAATGTGATGTCAAGCATA
GGAAAGGAACAGCTATAAATTGGGGTGATGGGGAATAAGCCTTCTTGATT
AATGACTAACAAACTCTTTAAAGAAAGATGTGGAAAGGAAAAAGAGCAAA
GAAACTCGTCTAAGAGGTCAGCGTTGCCTCAGAGAGGTATGTGAAGTAAA
ACCATCGCAGCCAGTGTGATGGAACAGAGCGATGGGGTAGGAGGACCACA
GCAGCTTGAGTGTGGTGAAGATAGCATCACCCAAGGAAGTGCAGGCCTAG
GAGGGGCAGCTCAGACACCTCGTCAATCACTGGGCAGGTGAGCAGAGGAT
GAAGTTAGGGTCCCTCGTCACACTGCACACAAAAATTGACTCTGGTCTAT
TTGAAAATAATAGAACATAG

Query= MSMg01no261_o24.g1 MSMg01no261_o24.g1 CHROMAT_FILE:
MSMg01no261_o24.g1 PHD_FILE: MSMg01no261_o24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:58:27 2005
         (633 letters)



>mm_chr2_72766091_72767120
          Length = 1030

 Score = 1143 bits (591), Expect = 0.0
 Identities = 623/637 (97%), Gaps = 7/637 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   aaaagtggggaagtcaccaattgctatccatcagtagcagatagaggcatcaccagaggc 60
           ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| 
Sbjct: 197 aaaagtggggaagtcaccaattgctatccatcagtagcatatagaggcttcaccagaggt 256

                                                                       
Query: 61  taaagttagtgagttccttcagagaaactttgcttgctctggacttcttcctcaatgttt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 taaagttagtgagttccttcagagaaactttgcttgctctggacttcttcctcaatgttt 316

                                                                       
Query: 121 ggattagtatttaccatgttcataatctcttttaatgctggagaactactttagttttct 180
           |||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||
Sbjct: 317 ggattagtatttaccatgttcataatctcttttaatgctggagaacttttttagttttct 376

                                                                       
Query: 181 tttccttgttttttattattttatttttcattaacttatt----tttttttcttgtcaaa 236
           ||||||||||||||||||||||||||||||||||||||||    ||||||||||||||||
Sbjct: 377 tttccttgttttttattattttatttttcattaacttattcttttttttttcttgtcaaa 436

                                                                       
Query: 237 ataatccgtacatttaatgtgatgtcaagcataggaaaggaacagctataaattggggtg 296
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 ataatccgtacatttaatgtgatgtcaagcataggaaaggaacagctataaattggggtg 496

                                                                       
Query: 297 atggggaataagccttcttgattaatgactaacaaactctttaaagaaagatgtggaaag 356
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 atggggaataagccttcttgattaatgactaacaaactctttaaagaaagatgtggaaag 556

                                                                       
Query: 357 gaaaaagagcaaagaaactcgtctaagaggtcagcgttgcctcagagaggtatgtgaagt 416
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 557 gaaaaagagcaaagaaactcgtctgagaggtcagcgttgcctcagagaggtatgtgaagt 616

                                                                       
Query: 417 aaaaccatcgcagccagtgtgatggaacagagcgatggggtaggaggaccacagcagctt 476
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 aaaaccatcgcagccagtgtgatggaacagagcgatggggtaggaggaccacagcagctt 676

                                                                       
Query: 477 gagtgtggtgaagatagcatcacccaaggaagtgcaggcctaggaggggcagctcagaca 536
           ||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||
Sbjct: 677 gagtgtggtgaagatagcatcacccaaggaagtgcaggcctagg---ggcagctcagaca 733

                                                                       
Query: 537 cctcgtcaatcactgggcaggtgagcagaggatgaagttagggtccctcgtcacactgca 596
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 cctcgtcaatcactgggcaggtgagcagaggatgaagttagggtccctcgtcacactgca 793

                                                
Query: 597 cacaaaaattgactctggtctatttgaaaataataga 633
           |||||||||||| ||||||||||||||||||||||||
Sbjct: 794 cacaaaaattgattctggtctatttgaaaataataga 830


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 633
Length of database: 1030
Length adjustment: 10
Effective length of query: 623
Effective length of database: 1020
Effective search space:   635460
Effective search space used:   635460
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)