Query= MSMg01no262_j13.b1 MSMg01no262_j13.b1 CHROMAT_FILE:
MSMg01no262_j13.b1 PHD_FILE: MSMg01no262_j13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:59:17 2005
(244 letters)
>mm_chr2_93052183_93052826
Length = 644
Score = 464 bits (240), Expect = e-135
Identities = 243/244 (99%)
Strand = Plus / Plus
Query: 1 atctgaggctgggtttcctaccctggcaaccccaaggccacttttccctgccctagtctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atctgaggctgggtttcctaccctggcaaccccaaggccacttttccctgccctagtctc 260
Query: 61 tctggttgatgtggaaataggaagccatgctgtcttgagtggaagaagagaggagtgcta 120
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 261 tctggttgatgtggaaataggaagccatgctgtcttgagtggaagaagggaggagtgcta 320
Query: 121 tcttcagctgaaacagaggcccaagatgggcagaaaggtagtgagattcagggaggggcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcttcagctgaaacagaggcccaagatgggcagaaaggtagtgagattcagggaggggcg 380
Query: 181 tttgatgtctcacacagagccctgtctgcttcactcagtaaattcctgtgtttcacagat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttgatgtctcacacagagccctgtctgcttcactcagtaaattcctgtgtttcacagat 440
Query: 241 taac 244
||||
Sbjct: 441 taac 444
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no262_j13.g1 MSMg01no262_j13.g1 CHROMAT_FILE:
MSMg01no262_j13.g1 PHD_FILE: MSMg01no262_j13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:59:17 2005
(322 letters)
>mm_chr2_93208301_93209020
Length = 720
Score = 584 bits (302), Expect = e-171
Identities = 315/320 (98%), Gaps = 2/320 (0%)
Strand = Plus / Minus
Query: 1 caggggaattcgaggctctcttctgacctgcaagggcaccagacacacaaatagtgcaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 caggggaattcgaggctctcttctgacctgcaagggcaccagacacacaaatagtgcaca 567
Query: 61 gacatcaatgcaggcaaaacacccatgctcaaaaataaaataagaatacattttaaaaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 gacatcaatgcaggcaaaacacccatgctcaaaaataaaataagaatacattttaaaa-- 509
Query: 121 agagagagagagaaagagaagctgtggacatttgaagaaacactctactttgcctcttta 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 508 agagagagagagaaagagaagctgtggacatttgaagaaacactctactttgccacttta 449
Query: 181 gaaacacagttgcctagggtaagatttttgttcactttttgggctactattttttcataa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 gaaacacagttgcctagggtaagatttttgttcactttttgggctactattttttcataa 389
Query: 241 aggggctttctgatctcaggagttcctaagacacactatcagctgtaagggggtggggcc 300
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 388 tggggctttctgatctcaggagtccctaagacacactatcagctgtaagggggtggggcc 329
Query: 301 tgctgctcaggtttgagtgg 320
||||||||||||||||||||
Sbjct: 328 tgctgctcaggtttgagtgg 309
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 322
Length of database: 720
Length adjustment: 9
Effective length of query: 313
Effective length of database: 711
Effective search space: 222543
Effective search space used: 222543
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
