ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCAGTATTTTTCCCCGCACCAGCAATTTAAGAGCAGCCACGGGATTTTA
TTTGCTAGTGAGTCATAATGATATGTTAGTGTTAATTAGTTTTTTTTCTT
CCTTTGATTTTATTGGTCATAATTGTCAGTCTTCATACACAGTATATCAA
AGAGCTTTGTAATTTAGTTGTCAAGTGTGCAAAAATGATATTATCCTAAA
TGGCACATGTTTGGTGCATAGGCAGGGATTGAATTTAGTGCTTTCTATTT
AAAGATGCAGCCGTTTTCTTTGCTTTCTGCATGGAGCACATCGAAGACAT
TTGTAATTTAGTTGTCAAAAACATACACACACTTAAGTATTATCCTAAAA
ACCCTCTCTGTTTTGTCATTTGCAAACTAATAGGCTTCTAAACCACCAGT
CCTTTCATCCCATTTAATCCTTACAGATGTCTGTGCACTAATAAACAGCT
AAGTTCCCGCCACCCTCCTACTCCCTGGAGCATGCTGGCGCTTTTGGTAG
ATGCCTTCCCATCCACTCGGTTAGTCAGTTGGCAGCACTGTAAATACTGC
CCAATATTAAATTCCCCTTGCTAGGATGGTAGGACAATCTCAGAAGCATT
TGACTCTGGGCTTGATTTATAGCACATCCTTCCCCCGACTCTCCTAATCA
GATCACATTCTGATAAACCTCCGGAACACCTGGTCACAGGATTTCAAN

ACCGATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXCCAACAGAGGAATCTCGAATGGT
TCAGAAACACTTAAATAAATTTTCAACATCCTTAATTGTACTGGCGGGTT
TTGTGTCAACTTGACACAGGCTAGAGTTATCACAGAGAAAGGAGCAGGCT
GAGCAAGCCAGGGGAAACAAGCCAGTAAGTAACGTCCCTCCGTGGCCTCT
GCATCAGCTCCTGCTTCCTGACCTGCTTGAGTTCCAGTCCTGACTTCCCT
TGGTGATGAACAGCAGTACAGAAGTGTAAGCTGAATAAACCCTTTCCTCC
CCAACTTGCCTCTTAGTCTTGTATGTTTGCGCCCCACCAGAAACCCTGAC
TAAGACATTAATCATCAGAGAAATTCAAATCAAAATGACCCTGAGATTTC
TACCTTACACCAGTCAGAATGGCCAAAATAAAACACTCAAGTGACAGTAC
ATGCTGGCAAGGATGTGGAGAAAGAGAAACACTGCTCTATTACCGGTGGG
ATGGCAAACTGGTACAACCACTCTGGAAATCAATGTGGCAGTTGGTTCCT
CAGAAAATTTGAAATAGCTCTACCTGAATACCCAGCTATACCACTAGTAT
AAATATACTCAAAATATATTCTACCATACCGCATGGATGCATGTTCCACC
ATGTGTGGAGAGCCGCGAGCTATCGTCATCTTGAGCCTTTACTGTGCCTA
ACTG

Query= MSMg01no263_e14.b1 MSMg01no263_e14.b1 CHROMAT_FILE:
MSMg01no263_e14.b1 PHD_FILE: MSMg01no263_e14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:00:09 2005
         (672 letters)



>mm_chr2_101479454_101480523
          Length = 1070

 Score = 1205 bits (623), Expect = 0.0
 Identities = 657/669 (98%), Gaps = 2/669 (0%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattcagtatttttccccgcaccagcaatttaagagcagccacgggattttatttgct 63
           ||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||
Sbjct: 870 ggaattcagtattttgccaggcaccagcaatttaagagcagccacgggattttatttgct 811

                                                                       
Query: 64  agtgagtcataatgatatgttagtgttaattagttttttttcttcctttgattttattgg 123
           |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||
Sbjct: 810 agtgagtcataatgatatgttagtgttaattag--ttttttcttcctttgattttattgg 753

                                                                       
Query: 124 tcataattgtcagtcttcatacacagtatatcaaagagctttgtaatttagttgtcaagt 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 752 tcataattgtcagtcttcatacacagtatatcaaagagctttgtaatttagttgtcaagt 693

                                                                       
Query: 184 gtgcaaaaatgatattatcctaaatggcacatgtttggtgcataggcagggattgaattt 243
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 gtgcaaaaatgacattatcctaaatggcacatgtttggtgcataggcagggattgaattt 633

                                                                       
Query: 244 agtgctttctatttaaagatgcagccgttttctttgctttctgcatggagcacatcgaag 303
           ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 632 agtgctttctattgaaagatgcagccattttctttgctttctgcatggagcacatcgaag 573

                                                                       
Query: 304 acatttgtaatttagttgtcaaaaacatacacacacttaagtattatcctaaaaaccctc 363
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 acattcgtaatttagttgtcaaaaacatacacacacttaagtattatcctaaaaaccctc 513

                                                                       
Query: 364 tctgttttgtcatttgcaaactaataggcttctaaaccaccagtcctttcatcccattta 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 tctgttttgtcatttgcaaactaataggcttctaaaccaccagtcctttcatcccattta 453

                                                                       
Query: 424 atccttacagatgtctgtgcactaataaacagctaagttcccgccaccctcctactccct 483
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 452 atccttacagatgtctgtgcactaataaacagctaagttcctgccaccctcctactccct 393

                                                                       
Query: 484 ggagcatgctggcgcttttggtagatgccttcccatccactcggttagtcagttggcagc 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 ggagcatgctggcgcttttggtagatgccttcccatccactcggttagtcagttggcagc 333

                                                                       
Query: 544 actgtaaatactgcccaatattaaattccccttgctaggatggtaggacaatctcagaag 603
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 actgtaaatactgcccgatattaaattccccttgctaggatggtaggacaatctcagaag 273

                                                                       
Query: 604 catttgactctgggcttgatttatagcacatccttcccccgactctcctaatcagatcac 663
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 272 catttgactctgggcttgatttatagcacatccttcccctgactctcctaatcagatcac 213

                    
Query: 664 attctgata 672
           |||||||||
Sbjct: 212 attctgata 204


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 672
Length of database: 1070
Length adjustment: 10
Effective length of query: 662
Effective length of database: 1060
Effective search space:   701720
Effective search space used:   701720
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)