Query= MSMg01no263_h16.b1 MSMg01no263_h16.b1 CHROMAT_FILE:
MSMg01no263_h16.b1 PHD_FILE: MSMg01no263_h16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:00:24 2005
(672 letters)
>mm_chr2_73471732_73472802
Length = 1071
Score = 1224 bits (633), Expect = 0.0
Identities = 659/670 (98%), Gaps = 5/670 (0%)
Strand = Plus / Minus
Query: 5 gaattcactatttg--tccctgatgacctctggcaaaacaaaaagatagaagaggcacag 62
|||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 871 gaattcactatttgttt---tgatgacctctggcaaaacaaaaagatagaagaggcacag 815
Query: 63 tccattgtcatgcaatgactgtgatcacagaatgaaggaagtataaggcatgtgaatttt 122
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 814 tccattgtcatgcaatgactgtgatcacagaatgaaggaaatataaggcatgtgaatttt 755
Query: 123 agatgtaaaatgcccacagggaatctggttaactgtactatagaagcggaagttaaacta 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 754 agatgtaaaatgcccacagggaatctggttaactgtactatagaagcggaagttaaacta 695
Query: 183 gggctgatgcttctaacacagtttgctgggaacaatgcaagctacttctaaacatttttg 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 694 gggctgatgcttctaacacagtttgctgggaacaatgcaagctacttctaaacatttttg 635
Query: 243 tttttagaacaaaatacccataattggttcagagtgccattataaaaaaaaaatctctcc 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 tttttagaacaaaatacccataattggttcagagtgccattataaaaaaaaaatctctcc 575
Query: 303 cggcctgaagtgtatgtactgattccttaacagctgctttctgacatacacatgcaacct 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 cggcctgaagtgtatgtactgattccttaacagctgctttctgacatacacatgcaacct 515
Query: 363 ctgactagagaacacggtgctgaacaggtaaaacagttcagcatgtgttattggaacaag 422
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 514 ctgactagagaacacggtgctgaacaggtaaaacagttcagcatgtgttataggaacaag 455
Query: 423 tgctctgtgtcttttaaagtgtcacatacaccactgctctcatgaggcaggaaggggctg 482
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 ggccctgtgtcttttaaagtgtcacatacaccactgctctcatgaggcaggaaggggctg 395
Query: 483 tgttaacattggtagtcagtgctcttatgtttaagtaataaaccaagcaccatccactat 542
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 tgttaacgttggtagtcagtgctcttatgtttaagtaataaaccaagcaccatccactat 335
Query: 543 tggttgcgtggtgtaacttcagatgcttcaccacgaggtanatgataggtacaatgggga 602
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 334 tggttgcgtggtgtaacttcagatgcttcaccacgaggtaaatgataggtacaatgggga 275
Query: 603 cttattccatattcccattccatttttattcacctggatatttagtaagtaatacatact 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 cttattccatattcccattccatttttattcacctggatatttagtaagtaatacatact 215
Query: 663 tttcatgaga 672
||||||||||
Sbjct: 214 tttcatgaga 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 672
Length of database: 1071
Length adjustment: 10
Effective length of query: 662
Effective length of database: 1061
Effective search space: 702382
Effective search space used: 702382
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no263_h16.g1 MSMg01no263_h16.g1 CHROMAT_FILE:
MSMg01no263_h16.g1 PHD_FILE: MSMg01no263_h16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:00:24 2005
(375 letters)
>mm_chr2_73316287_73317061
Length = 775
Score = 725 bits (375), Expect = 0.0
Identities = 375/375 (100%)
Strand = Plus / Plus
Query: 1 caaatattatagaatccattggtgattaaggagttaaaggcaaggcttgagacaagaaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caaatattatagaatccattggtgattaaggagttaaaggcaaggcttgagacaagaaac 260
Query: 61 atgcccttttcccacttacccccaagagctccgtctctctgagcagacatcagaaatcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atgcccttttcccacttacccccaagagctccgtctctctgagcagacatcagaaatcaa 320
Query: 121 aggctccacaagatgcaacaccagccctgccccacctcctctacaagtgcttcatgggtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aggctccacaagatgcaacaccagccctgccccacctcctctacaagtgcttcatgggtc 380
Query: 181 acagggtaattcgggagtgacactgtaccactgagaaagagcagtctgtgtcttctagaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acagggtaattcgggagtgacactgtaccactgagaaagagcagtctgtgtcttctagaa 440
Query: 241 ccctcttttaggtatacacatatataccccactctcctcatggacctcaaacaggtatat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccctcttttaggtatacacatatataccccactctcctcatggacctcaaacaggtatat 500
Query: 301 cgaacgtgataaaccctgaactctagatgtcccctgctgtatagccaccctgcccactgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cgaacgtgataaaccctgaactctagatgtcccctgctgtatagccaccctgcccactgc 560
Query: 361 cttcattcctttttg 375
|||||||||||||||
Sbjct: 561 cttcattcctttttg 575
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 375
Length of database: 775
Length adjustment: 9
Effective length of query: 366
Effective length of database: 766
Effective search space: 280356
Effective search space used: 280356
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
