Query= MSMg01no263_i08.b1 MSMg01no263_i08.b1 CHROMAT_FILE:
MSMg01no263_i08.b1 PHD_FILE: MSMg01no263_i08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:00:27 2005
(314 letters)
>mm_chr2_91857752_91858464
Length = 713
Score = 555 bits (287), Expect = e-162
Identities = 305/311 (98%), Gaps = 1/311 (0%)
Strand = Plus / Plus
Query: 4 ggaattccttgtgttcccatagagaacagaacccagcatggacataaatagggggcaaga 63
||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccttgtggtcctatagagaacagaacccagcatggacataaatagggggcaaga 263
Query: 64 ggcctgtccagggcactccagctgtgtacctaaaactccaggtatccatggtgccctaag 123
||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 264 ggcctgtccaggg-actccagctgtgtacctaaaactccaggtatccatgatgccctaag 322
Query: 124 gacggcaacctggagaatgcaggcagagcccttcggatgcaaccaaaacaagaaagcatg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 gacggcaacctggagaatgcaggcagagcccttcggatgcaaccaaaacaagaaagcatg 382
Query: 184 caaaggagttagtctctagctatttctctctgttctcagattccctggagcattctcaat 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 caaaggagttagtctctagctatttctctctgttctcagattccctggagcattctcaat 442
Query: 244 ttggagagaattgtgcaccctctctgagtctccttttctcatttgcacaaggaatgggat 303
||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 443 ttggagagaattgtgtaccctctctgagtctccttttctcatctgcacaaggaatgggat 502
Query: 304 gctggttggat 314
|||||||||||
Sbjct: 503 gctggttggat 513
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 314
Length of database: 713
Length adjustment: 9
Effective length of query: 305
Effective length of database: 704
Effective search space: 214720
Effective search space used: 214720
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no263_i08.g1 MSMg01no263_i08.g1 CHROMAT_FILE:
MSMg01no263_i08.g1 PHD_FILE: MSMg01no263_i08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:00:27 2005
(288 letters)
>mm_chr2_92054040_92054728
Length = 689
Score = 536 bits (277), Expect = e-157
Identities = 286/289 (98%), Gaps = 1/289 (0%)
Strand = Plus / Minus
Query: 1 tcaggcctaactactcaattattggcaacaggaccttcgagttttaatgggttatcaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 tcaggcctaactactcaattattggcaacaggaccttcgagttttaatgggttatcaaat 430
Query: 61 tcaggagcatgcaagtctagtgtggttatcagaaatacaaatgcattttagatacagctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 tcaggagcatgcaagtctagtgtggttatcagaaatacaaatgcattttagatacagctc 370
Query: 121 tgtgacgctaaaaattcacttttggtgcaaactataaagccttgttttgaagaaggaagc 180
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 tgtgaagctaaaaattcacttttggtgcaaactataaagccttgttttgaagaaggaagc 310
Query: 181 ttttttaggaggtt-aaaaaaaatcacttacaaaatcacttaatatttgattgagtccag 239
|||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 309 ttttttaggaggttaaaaaaaaatcacttacaaaattacttaatatttgattgagtccag 250
Query: 240 ctaaaatcatgcacactatgtgagctttgtaaaaatacttaccaattct 288
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 ctaaaatcatgcacactatgtgagctttgtaaaaatacttaccaattct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 689
Length adjustment: 9
Effective length of query: 279
Effective length of database: 680
Effective search space: 189720
Effective search space used: 189720
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
