MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-264E04
Chromosome	2 (Build37)
Map Location	162,391,848 - 162,392,162
singlet/doublet	singlet
Overlap gene	Ptprt
Upstream gene	none
Downstream gene	LOC100043895, LOC100043896, LOC100043696, LOC497655, LOC668947, Sfrs6, L3mbtl, LOC241765, Sgk2, Ift52, Mybl2, 2410116G06Rik, LOC269389, Jph2, 3230401D17Rik, LOC100043708, Gdap1l1, D930001I22Rik, LOC100043899, Hnf4a
Link	Open Mouse BAC browser

Click to get alignment info.

name	Ptprt (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19281 MGI:1321152
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043895 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043895
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	LOC100043896 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043896
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs

name	LOC100043696 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043696
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 79 ESTs, 5 Proteins

name	LOC497655 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:497655
definition	note : protein tyrosine phosphatase-like (proline instead of catalytic arginine), member a pseudogene pseudo : _no_value

name	LOC668947 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668947
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins pseudo : _no_value

name	Sfrs6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67996 MGI:1915246
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	L3mbtl (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:241764 MGI:2676663
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC241765 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:241765
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 69 ESTs, 23 Proteins pseudo : _no_value

name	Sgk2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:27219 MGI:1351318
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ift52 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:245866 MGI:2387217
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mybl2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17865 MGI:101785
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2410116G06Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68236 MGI:1915486
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC269389 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:269389
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 ESTs, 4 Proteins

name	Jph2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:59091 MGI:1891496
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	3230401D17Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66680 MGI:1913930
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043708 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043708
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Gdap1l1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:228858 MGI:2385163
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	D930001I22Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:228859 MGI:2444508
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043899 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043899
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 8 Proteins

name	Hnf4a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15378 MGI:109128
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ptprt (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142371259 GeneID:19281 MGI:1321152
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein tyrosine phosphatase, receptor type, T transcript_id : NM_021464.2

name	LOC100043895 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250243 GeneID:100043895
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : hypothetical protein LOC100043895 transcript_id : XM_001481185.1

name	LOC100043896 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250245 GeneID:100043896
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs product : hypothetical protein LOC100043896 transcript_id : XM_001481186.1

name	LOC100043696 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250100 GeneID:100043696
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 79 ESTs, 5 Proteins product : similar to ribosomal protein L10 transcript_id : XM_001480756.1

name	Sfrs6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142366948 GeneID:67996 MGI:1915246
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : splicing factor, arginine/serine-rich 6 transcript_id : NM_026499.3

name	L3mbtl (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124486778 GeneID:241764 MGI:2676663
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : l(3)mbt-like (Drosophila) transcript_id : NM_001081338.1

name	Sgk2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:7305482 GeneID:27219 MGI:1351318
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : serum/glucocorticoid regulated kinase 2 transcript_id : NM_013731.1

name	Ift52 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142381777 GeneID:245866 MGI:2387217
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : intraflagellar transport 52 homolog (Chlamydomonas) transcript_id : NM_172150.3

name	Mybl2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31543275 GeneID:17865 MGI:101785
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : myeloblastosis oncogene-like 2 transcript_id : NM_008652.2

name	2410116G06Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802654 GeneID:68236 MGI:1915486
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2410116G06 gene transcript_id : NM_026630.2

name	LOC269389 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250248 GeneID:269389
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 ESTs, 4 Proteins product : similar to granulosa cell HMG-box protein-1 transcript_id : XM_001481188.1

name	Jph2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:10947009 GeneID:59091 MGI:1891496
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : junctophilin 2 transcript_id : NM_021566.1

name	3230401D17Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31981222 GeneID:66680 MGI:1913930
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 3230401D17 gene transcript_id : NM_025699.2

name	LOC100043708 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250106 GeneID:100043708
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100043708 transcript_id : XM_001480769.1

name	Gdap1l1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21450260 GeneID:228858 MGI:2385163
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ganglioside-induced differentiation-associated protein 1-like 1 transcript_id : NM_144891.1

name	D930001I22Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142376308 GeneID:228859 MGI:2444508
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA D930001I22 gene transcript_id : NM_173397.3

name	LOC100043899 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250250 GeneID:100043899
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 8 Proteins product : similar to novel SCP-like extracellular protein domain containing protein transcript_id : XM_001481189.1

name	Hnf4a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46575915 GeneID:15378 MGI:109128
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : hepatic nuclear factor 4, alpha transcript_id : NM_008261.2

name	Ptprt (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:10946856 CCDS:CCDS17001.1 GeneID:19281 MGI:1321152
definition	GO_component : GO:0005886 - plasma membrane [Evidence IEA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004725 - protein tyrosine phosphatase activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0007185 - transmembrane receptor protein tyrosine phosphatase signaling pathway [Evidence IEA] codon_start : 1 note : receptor protein tyrosine phosphatase-rho product : protein tyrosine phosphatase, receptor type, T protein_id : NP_067439.1

name	LOC100043895 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250244 GeneID:100043895
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001481235.1

name	LOC100043896 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250246 GeneID:100043896
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001481236.1

name	LOC100043696 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250101 GeneID:100043696
definition	codon_start : 1 product : similar to ribosomal protein L10 protein_id : XP_001480806.1

name	Sfrs6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543689 CCDS:CCDS17002.1 GeneID:67996 MGI:1915246
definition	GO_function : GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] codon_start : 1 exception : mismatches in translation product : arginine/serine-rich splicing factor 6 protein_id : NP_080775.2

name	L3mbtl (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124486779 GeneID:241764 MGI:2676663
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003700 - transcription factor activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 note : Lethal(3)malignant brain tumor-like protein product : l(3)mbt-like protein_id : NP_001074807.1

name	Sgk2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7305483 CCDS:CCDS17004.1 GeneID:27219 MGI:1351318
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0015459 - potassium channel regulator activity [Evidence ISS]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004682 - protein kinase CK2 activity [Evidence ISS]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0017080 - sodium channel regulator activity [Evidence ISS]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006468 - protein amino acid phosphorylation [Evidence ISS] [Evidence IEA] codon_start : 1 note : serum/glucocorticoid regulated kinase-like product : serum/glucocorticoid regulated kinase 2 protein_id : NP_038759.1

name	Ift52 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981999 CCDS:CCDS17005.1 GeneID:245866 MGI:2387217
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0007368 - determination of left/right symmetry [Evidence IMP]; GO:0009953 - dorsal/ventral pattern formation [Evidence IMP]; GO:0042733 - embryonic digit morphogenesis [Evidence IMP]; GO:0001947 - heart looping [Evidence IMP]; GO:0001841 - neural tube formation [Evidence IMP]; GO:0045862 - positive regulation of proteolysis [Evidence IMP]; GO:0007224 - smoothened signaling pathway [Evidence IMP] codon_start : 1 product : intraflagellar transport 52 homolog protein_id : NP_742162.2

name	Mybl2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678974 CCDS:CCDS17006.1 GeneID:17865 MGI:101785
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA] GO_process : GO:0050875 - cellular physiological process [Evidence IEA]; GO:0000074 - regulation of progression through cell cycle [Evidence IEA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : myeloblastosis oncogene-like 2 protein_id : NP_032678.1

name	2410116G06Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13386118 CCDS:CCDS17007.1 GeneID:68236 MGI:1915486
definition	codon_start : 1 product : hypothetical protein LOC68236 protein_id : NP_080906.1

name	LOC269389 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250249 GeneID:269389
definition	codon_start : 1 product : similar to granulosa cell HMG-box protein-1 protein_id : XP_001481238.1

name	Jph2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:10947010 CCDS:CCDS17008.1 GeneID:59091 MGI:1891496
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005624 - membrane fraction [Evidence IDA]; GO:0005792 - microsome [Evidence IDA]; GO:0016529 - sarcoplasmic reticulum [Evidence IDA] [Evidence TAS]; GO:0030018 - Z disc [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0007275 - development [Evidence IEA]; GO:0007204 - elevation of cytosolic calcium ion concentration [Evidence IMP] codon_start : 1 product : junctophilin 2 protein_id : NP_067541.1

name	3230401D17Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981223 CCDS:CCDS17009.1 GeneID:66680 MGI:1913930
definition	codon_start : 1 product : oxidative stress responsive 1 protein_id : NP_079975.2

name	LOC100043708 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250107 GeneID:100043708
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480819.1

name	Gdap1l1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21450261 GeneID:228858 MGI:2385163
definition	codon_start : 1 product : ganglioside-induced differentiation-associated protein 1-like 1 protein_id : NP_659140.1

name	D930001I22Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27734174 GeneID:228859 MGI:2444508
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] codon_start : 1 product : hypothetical protein LOC228859 protein_id : NP_775573.1

name	LOC100043899 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250251 GeneID:100043899
definition	codon_start : 1 product : similar to novel SCP-like extracellular protein domain containing protein protein_id : XP_001481239.1

name	Hnf4a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46575916 CCDS:CCDS17012.1 GeneID:15378 MGI:109128
definition	GO_component : GO:0005634 - nucleus [Evidence IDA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0004879 - ligand-dependent nuclear receptor activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0005496 - steroid binding [Evidence IEA]; GO:0003707 - steroid hormone receptor activity [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IDA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006629 - lipid metabolism [Evidence IMP]; GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IMP] [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : HNF4 alpha; Nuclear receptor 2A1 product : hepatic nuclear factor 4, alpha protein_id : NP_032287.2

name	LOC668947 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668947
definition	number : 1 pseudo : _no_value

name	LOC241765 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149250247 GeneID:241765
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 69 ESTs, 23 Proteins product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) pseudo : _no_value transcript_id : XR_035035.1

clone name	MSMg01-461B24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-313L05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-543H13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-346E02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-492D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-110L19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-544P21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-479A12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-206E20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-522L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-346J17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-439B16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397H02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-293E17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-122B12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-045K01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270E18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-317G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-434E07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-501F03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-474B17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-363J08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-542A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-411E01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-070J16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-089I06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531C20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-339L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-275P13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-260F19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-457M02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-346F05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476B07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-493N11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-463H03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-084I14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-338H12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-104G21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-169L04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-465D03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-092P05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-482N21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377F20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-527N02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-062L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316K03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-418E10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-264E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-088G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-484G05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-171N01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-187F16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-327A03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-155B13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-155C13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-316L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-046G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-127G13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-325E03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-394J02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-151H08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-172J20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-325A24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-075K01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-524I07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-171C14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-502H12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-464L17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-161N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-401A17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-465B18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-355G21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-423P24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-400D07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-212D03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-217G09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-115B24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-369I16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-057A12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-531F05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-341O01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-187K19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-406G04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-494D20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-127K17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-449H12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-351J18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-271O20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-288B05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-502K21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-078K19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-417B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-018H02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-253O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125N07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-101J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192N24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176F12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-032J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-060J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201H02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-176B22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-345I11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-073K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325L04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-195A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-142B14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-142B16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-058C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333H10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-127C24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-318P01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094J05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-131C18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-093B18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-007H19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117H07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-043E11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-122G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025G09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-273O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293M19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-031I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161C14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-255C18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233O04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-273E23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-230G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260G13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-084M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234L24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-160D10
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-264E04.T7 (MSMg01no264_e04.b1)	MSMg01-264E04.TJ (MSMg01no264_e04.g1)
ACC	AG405856	AG405857
length	733	1,134
length of high quality (start - end)	317 (45 - 361)	---
definition	CHROMAT_FILE: MSMg01no264_e04.b1 PHD_FILE: MSMg01no264_e04.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 21:01:23 2005	CHROMAT_FILE: MSMg01no264_e04.g1 PHD_FILE: MSMg01no264_e04.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 21:01:23 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA ATTCCTGGACCTGTCCCATCTCATAAAATATGCAAGCCCATCTTCAGCTA TCAGGACAAGAGGGCCCTAACCACCCAGAAACTAATTTCACTTGCACATC TTCAGTAAAAAGTTCACATTCCCTGGCTAGTGTCTACCCTCTACTCTCAA GTCTCTTGCAAATTTGTTCACCTTTCATGAGATCCATCGACATTAAAAAA AAGAAGAAGAAATGTTAGAAAATCATATTCCTAGAACTCAACAGGAAGCC TCATACTCCCCACAGGTGTGTGCTCACACTCACAAGTGTACACACTAGTG CACACACACATTTTTATTTACACACCCGCCCCCCCGTACAAAGAGGGAGA GTATGTAGATTCTGCTACTACTCTTACAAAAACATTAATCTCTCCCTTTT CGAAGAGACATTCCGAGAGATCCCCGCCCGAGGTCACTAAACCCGTAGGC ATCTCTGAGTCTGCCACTACACAGGATGAGACGGAATACTCAGGCCTGAA CCTGCCCGAGGACGACAAGCAAACCGGTATTCTGCCTCGATTCCCGTGGT CTGCACATGGCTGATCTAATAAGGTTTCTCCTGGGTCTTTATCCAGAGCC CCACCTCCTCACTTGTGAACACAGAGGGATGCTTGAGGCCTCTGCATCAC AGAATGCCTTCCTCGGAGCTATTTTGTAGATAT	CCCCCCTCTCTNNNGGGGGGGGTGAGGTAATAGATAAAGGTGGTGGAGTG ATGTGATTTNTTGCTTNNNNNNNNTTTTTCCATATGGATATAGGGGTTAA GGGCCCGGGGGGGGGGCCCCCCCCCGGGGCCCCGCTCCAAAAAATTTTTG GGTGGGGAAAACCTTTTTTATATAAAAGGGAGTCTCCCCGCCCGGCGAAA ATATATTTTTTTTCTTTTAATAAAAAAAAACACCCGCGGGGGGGGGGGGC GGTTTCCCCCCCCCCCTTTTCTTTAAAATAAAACGTGGGGGGAGAAACCC CCTAAGAAAATTTGGGGGGGAGGAGCTCTTCTCCCTCTTCACAAACAAAA AACNAAACTCCTTTTTTTTTTTTTTTTGGGGGACGTGNNAATATNNTNGG GAGGGGGGGGGGGGTGTTCCTCCCTCCCAAAAAAATATATTTTATTTTCT TTTTTTTTTTATAAAGGGAGGCTCTTTCTTTTTTTATAATAAAAAAAAAG AGGGAGGAAAGGGGNGAGAGACTTCCAACATCAACCACTTTCTAATTCAT CATATACTATTTAATTGTGAAATAGGTGGTGCGCGGGTTTAGCCCTCAAC CACATAAACATAAATATCGTCGCTTACCCCCAACAGCGGATGAGGAGGGC GAGTAATATCACTACATATCCCTNAGAATATATAAAGGAGTTATTTATAT ATATTTCTACCTGCACACCTCTCTCATTAAGGTGTTTGGTTTGTGTGGAT AATATTTTATAAAATAACGAGNAGCGGCGGAGCCCACGCCGGACCACTTA TAGCGAACGTGGACTTCGTGAGGGTAGAGTTAGAAACACCTATTTTAATT CCGTCCCCCGGCCCCTTCGTTTTATCTTATTAACCGGCCTTACGAAATCG AATAACCCCGCGCGGAGACGATTTCCTTTCGTGATTCTGTTATAAAGCAC GGAGATCTATCTCACCATTCTGTCGTAGTATTTATATGCATAACGATGTA ATTACTCCTTCATTTAATACCCATCTCGTTCTTCTCCATCTTAATATTCC ACATGCGCTGTTGCTCCTGAGTCTTCTGCATTTTTTGAGCGGGTGGCTGG CNCTCAGCTATCATTATGATTTTTTTGTCTTTTT
quality values	Open. Hide. 8 10 8 8 12 9 12 19 32 26 29 28 28 22 22 28 23 21 10 10 10 21 21 41 27 28 28 26 26 30 25 25 12 12 11 12 12 26 26 22 22 10 12 12 24 30 57 57 35 35 35 37 37 42 59 57 37 25 23 13 13 19 18 20 18 32 31 42 42 42 42 42 42 31 31 22 31 31 42 42 40 31 29 29 39 43 34 32 28 28 32 42 42 42 42 42 42 36 48 47 32 32 15 15 15 30 30 47 39 37 39 33 33 37 30 30 34 19 10 8 8 8 9 17 37 37 37 37 33 33 33 37 47 47 48 48 48 43 43 36 36 36 40 32 28 28 25 31 31 42 42 43 42 48 40 37 28 41 32 39 42 37 31 24 28 28 30 44 44 47 47 43 41 41 30 41 28 32 37 42 42 42 42 30 42 42 57 43 46 43 43 43 57 47 54 54 57 57 43 39 37 43 43 42 43 43 43 35 43 43 43 35 43 43 43 42 42 28 43 35 43 43 52 52 52 52 52 44 44 37 37 52 43 43 52 52 52 52 52 52 52 52 43 47 43 41 29 29 33 41 41 31 33 36 43 43 52 52 52 54 57 57 57 52 43 43 32 31 31 43 38 44 37 35 35 50 59 50 43 43 42 44 33 33 28 36 28 28 28 36 36 28 35 35 42 44 44 40 40 43 57 57 57 57 43 43 43 39 42 32 32 28 37 31 42 37 37 39 30 28 27 18 18 18 27 24 42 42 48 48 43 43 43 43 43 43 43 43 43 43 35 35 39 39 43 39 44 43 41 41 43 59 48 47 34 28 18 15 12 11 11 14 11 15 8 8 8 9 10 13 11 11 11 11 11 16 12 15 12 23 16 22 13 17 16 18 15 19 12 13 12 15 15 11 11 10 13 10 10 11 18 20 15 11 9 9 10 9 9 11 11 9 15 9 9 9 9 12 10 11 11 12 13 8 8 8 8 8 12 8 8 8 8 6 6 6 8 8 10 19 28 25 23 14 12 12 14 22 23 21 12 12 12 12 12 13 19 13 12 15 12 12 15 15 13 9 12 9 9 10 10 15 12 10 10 8 8 10 10 10 10 10 11 10 10 8 8 8 8 8 8 10 8 6 6 8 6 9 12 21 10 11 11 12 13 10 12 10 10 9 8 8 8 8 15 8 8 8 8 9 6 8 6 6 6 6 10 10 10 10 10 10 7 6 6 8 6 8 8 8 10 10 11 13 13 24 28 32 19 18 17 17 17 18 18 12 16 11 11 9 18 16 12 10 10 10 13 13 10 10 10 12 16 14 12 12 11 11 11 12 12 13 13 11 11 15 13 12 13 13 13 13 11 14 19 9 9 10 10 10 8 9 10 10 10 10 27 25 16 16 8 8 6 6 8 8 9 9 10 11 14 12 18 14 10 10 12 10 10 10 16 17 12 12 10 10 10 17 12 15 14 11 9 9 9 9 14 12 15 10 10 8 8 8 10 8 8 8 8 8 10 15 11 13 10 10 10 10 10 10 10 11 11 12 12 10 10 13 10 10 10 12 8 10 9 8 8 8 9 9 10 12 10 6 6 6 7 8 8 8 8 10 10 15 15 15 15 14 14 14 9 8 8 8 8 12 12 16 15 12 11 11 11 18 14 8 8 8 10 8 8 8 8	Open. Hide. 6 8 8 7 7 9 6 8 8 8 3 0 0 0 3 7 7 10 12 11 12 8 6 6 6 6 6 6 9 9 8 8 8 8 8 8 11 9 8 8 8 8 8 8 10 6 8 6 6 6 6 8 8 8 8 8 8 8 3 0 3 8 9 9 10 3 0 0 0 0 0 0 0 0 3 9 9 10 9 9 9 9 7 7 8 8 8 8 8 8 8 8 8 8 10 10 10 10 10 11 11 11 12 12 19 14 20 20 20 20 23 29 23 25 16 16 11 15 16 28 30 27 17 9 9 9 8 9 8 8 8 8 6 6 6 6 9 10 13 12 13 13 11 11 11 21 14 12 11 10 8 6 6 6 8 8 12 11 8 8 8 8 8 8 8 8 9 8 8 6 6 6 6 6 7 7 8 8 8 8 8 8 8 8 6 6 8 7 8 8 8 8 9 9 10 10 11 11 11 14 6 6 6 6 6 6 8 10 16 17 11 11 6 6 6 13 14 6 6 6 6 6 8 12 20 19 17 7 10 6 6 6 8 8 6 6 6 6 22 21 31 22 22 19 19 14 8 6 6 6 6 8 6 10 10 10 20 23 27 24 16 12 15 11 13 11 11 8 8 8 8 8 10 18 28 9 9 7 7 7 8 10 8 8 8 8 8 8 22 13 13 10 10 10 10 12 12 13 13 16 8 8 6 8 8 8 6 8 8 8 8 10 10 10 10 10 10 10 9 8 8 8 8 8 8 8 8 8 8 8 8 8 8 10 10 10 10 10 6 8 6 7 10 10 6 6 6 15 13 8 8 11 3 0 3 11 10 10 15 13 13 9 9 10 11 15 23 27 27 22 25 30 18 14 10 9 8 8 8 8 10 8 8 6 6 6 3 0 0 3 7 8 8 3 0 0 3 0 3 9 9 9 9 12 12 28 22 10 10 11 9 9 10 9 9 9 10 10 10 10 10 11 11 11 12 10 8 8 8 8 10 11 8 8 8 8 8 10 12 12 23 15 9 9 9 14 14 11 11 10 12 12 15 15 13 12 15 11 10 10 12 10 10 13 19 11 10 8 8 8 8 8 8 8 8 15 11 12 12 9 12 19 14 12 12 9 9 8 8 8 8 7 11 14 22 19 8 8 8 8 8 8 11 10 10 10 10 10 10 10 11 11 11 3 0 3 10 9 9 9 9 10 10 9 9 10 8 8 8 8 8 8 10 11 10 10 11 9 9 7 8 8 8 8 8 12 10 10 8 8 8 8 8 8 8 8 8 6 6 6 6 8 8 8 8 8 8 8 9 9 10 12 11 13 13 13 8 8 6 6 6 8 8 10 8 8 8 12 12 12 12 8 8 8 8 8 8 8 6 6 6 8 8 8 9 10 10 8 8 8 8 8 8 8 8 8 9 8 8 8 6 6 6 6 8 10 10 13 8 8 8 8 8 8 8 9 12 11 11 12 11 11 11 9 9 9 9 8 8 8 8 8 8 10 10 10 10 10 12 12 11 10 10 9 9 8 8 8 8 10 8 8 3 0 3 9 8 8 6 6 8 8 6 6 8 8 8 8 8 8 8 8 8 12 10 10 10 10 9 7 9 6 8 8 10 11 11 10 10 13 10 10 8 8 6 6 8 8 13 10 8 8 8 8 8 8 8 8 8 8 8 8 9 9 8 8 8 8 8 8 17 10 11 11 8 8 6 6 8 8 10 16 15 16 16 16 23 16 20 15 13 8 8 11 8 8 8 8 8 8 3 0 3 6 8 6 9 9 8 8 8 8 8 8 8 9 10 9 9 10 11 10 8 8 7 7 8 8 8 8 11 10 9 11 8 8 8 8 8 8 8 8 6 6 8 8 10 12 8 8 8 10 11 11 12 11 11 11 8 8 8 8 6 6 8 8 10 17 9 9 9 9 8 8 8 8 8 8 8 8 8 8 9 10 10 10 9 8 6 6 6 6 8 8 8 19 8 6 6 6 8 8 8 8 6 6 8 8 11 11 11 9 8 8 8 8 8 9 11 11 12 11 11 11 11 11 9 8 8 11 11 8 9 10 8 8 8 6 7 6 6 8 8 8 8 8 6 6 6 8 8 8 8 8 8 8 8 8 8 8 8 6 6 6 8 8 8 8 8 8 14 9 10 10 8 8 8 8 8 8 8 8 8 11 12 11 11 11 16 9 9 8 8 6 6 8 8 8 8 8 8 8 8 9 9 6 8 6 6 8 8 9 9 9 9 11 11 10 9 10 10 8 8 8 8 8 8 6 6 6 8 11 10 11 11 10 10 10 8 8 6 6 8 8 8 10 8 9 10 10 16 11 6 6 8 10 8 6 6 8 8 6 6 6 8 8 9 9 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 12 13 13 8 8 6 7 8 6 9 6 6 8 8 8 8 8 8 8 8 6 6 8 10 8 8 8 8 12 14 8 8 10 8 6 6 6 6 8 8 10 8 8 8 8 8 3 0 3 8 9 9 9 9 7 6 8 6 6 7 6 9 9 9 11 8 21 13 13 11 9 8 8 8 8 8 10 15 15 15

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no264_e04.b1 MSMg01no264_e04.b1 CHROMAT_FILE:
MSMg01no264_e04.b1 PHD_FILE: MSMg01no264_e04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:01:23 2005
         (317 letters)



>mm_chr2_162391644_162392363
          Length = 720

 Score =  542 bits (280), Expect = e-158
 Identities = 306/316 (96%), Gaps = 5/316 (1%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcctggacctgtcccatctcataaaatatgcaagcccatcttcagctatcaggaca 64
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 205 gaattcctggacctgtcccatctcataaaatatgcaggcccatcttcagctatcaggaca 264

                                                                       
Query: 65  agagggccctaaccacccagaaactaatttcacttgcacatcttcagtaaaaagttcaca 124
           |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 265 agagggccctaaacacccagaaattaatttcacttgcacatcttcagtaaaaagttcaca 324

                                                                       
Query: 125 ttccctggctagtgtctaccctctactctcaagtctcttgcaaatttgttcacctttcat 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 325 ttccctggctagtgtctaccctctactctcaagtctcttgcaaatttgttctcctttcat 384

                                                                       
Query: 185 gagatccatcgacattaaaaaaaa-gaag---aagaaatgttagaaaatcatattcctag 240
           |||||||||||||||||||||||| ||||   |||||||||||||||||||||| |||||
Sbjct: 385 gagatccatcgacattaaaaaaaaagaaggagaagaaatgttagaaaatcatat-cctag 443

                                                                       
Query: 241 aactcaacaggaagcctcatactccccacaggtgtgtgctcacactcacaagtgtacaca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aactcaacaggaagcctcatactccccacaggtgtgtgctcacactcacaagtgtacaca 503

                           
Query: 301 ctagtgcacacacaca 316
           |||||||||| |||||
Sbjct: 504 ctagtgcacaaacaca 519


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 720
Length adjustment: 9
Effective length of query: 308
Effective length of database: 711
Effective search space:   218988
Effective search space used:   218988
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

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BAC

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Alignment Information