Query= MSMg01no265_a21.b1 MSMg01no265_a21.b1 CHROMAT_FILE:
MSMg01no265_a21.b1 PHD_FILE: MSMg01no265_a21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:02:25 2005
(313 letters)
>mm_chr2_168273932_168274643
Length = 712
Score = 530 bits (274), Expect = e-155
Identities = 301/310 (97%), Gaps = 1/310 (0%)
Strand = Plus / Minus
Query: 4 ggaattcctagtgcccatggttcccctttctttcccttccttcccttctcttaccagctt 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 ggaattcctagtgcccatggttcccctttctttcccttccttcccttctcttaccagctt 395
Query: 64 caaatttgcaatcctcctgtctcactgtcttcagctcacagaccactgccctgtgtcatt 123
|||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 394 caaacttgcaatcctcctgtctcactgtcttcagctcacagacctctgccctgtgtcatt 335
Query: 124 ctgccactgtgtctggcccttattgatttactcagagacaaagcaggacagataaagccc 183
||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 334 ctgtcactgtgtctggcccttattgatttactcagagacaaagcaggac-gataaagccc 276
Query: 184 tgtgggtgaattctgccccctaccacagaaggggcaagtccggaagtgcagctttgcctt 243
|||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||
Sbjct: 275 tgtgggtgaattctgcccactaccacagaaggggcaagtccagaagtgcagctttgcctt 216
Query: 244 tccacatagagagtgcatatgtgcagatgtgtgtgtgcatgtccgtgtatgcatgtatgt 303
|||||||||||||||| |||||||| |||||||||||||||| |||||||||||||||||
Sbjct: 215 tccacatagagagtgcttatgtgcaaatgtgtgtgtgcatgtacgtgtatgcatgtatgt 156
Query: 304 ttgtgtaggt 313
||||||||||
Sbjct: 155 ttgtgtaggt 146
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 313
Length of database: 712
Length adjustment: 9
Effective length of query: 304
Effective length of database: 703
Effective search space: 213712
Effective search space used: 213712
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no265_a21.g1 MSMg01no265_a21.g1 CHROMAT_FILE:
MSMg01no265_a21.g1 PHD_FILE: MSMg01no265_a21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:02:25 2005
(292 letters)
>mm_chr2_168136324_168137014
Length = 691
Score = 513 bits (265), Expect = e-150
Identities = 283/289 (97%), Gaps = 1/289 (0%)
Strand = Plus / Plus
Query: 1 cctacatcggggcatcgagacttctgtcctggaactcacgctgtaggccaggctggcctc 60
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 201 cctacatcggggcatcgagacttctgtcctggaactcactctgtaggccaggctggcctc 260
Query: 61 gaactcagaaatccacctgcttctagactccccagtgctaggattaaagacgtgcgccac 120
|||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||||||
Sbjct: 261 gaactcagaagtccacctgcctctaaactccccagtgctaggattaaagacgtgcgccac 320
Query: 121 cactgcccggctggttttttcttatttaagaatttaaatctgtcctaggccaatgtgcgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cactgcccggctggttttttcttatttaagaatttaaatctgtcctaggccaatgtgcgc 380
Query: 181 ctccgtacccctgactccacccacctcttgcctgtcttctcacgagactttcgaaatcac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctccgtacccctgactccacccacctcttgcctgtcttctcacgagactttcgaaatcac 440
Query: 241 gtggtttctggccacgaagttgagccagagcagaactgtctatctattc 289
||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 441 gtggtttctggccg-gaagttgagccagagcagaactgtctatctattc 488
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 691
Length adjustment: 9
Effective length of query: 283
Effective length of database: 682
Effective search space: 193006
Effective search space used: 193006
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
