Query= MSMg01no265_c22.b1 MSMg01no265_c22.b1 CHROMAT_FILE:
MSMg01no265_c22.b1 PHD_FILE: MSMg01no265_c22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:02:36 2005
(319 letters)
>mm_chr2_65624637_65625355
Length = 719
Score = 516 bits (267), Expect = e-151
Identities = 299/315 (94%), Gaps = 9/315 (2%)
Strand = Plus / Minus
Query: 4 ggaattcactttgtaggtcaggctggcctcgaactcaccgagatctgcctgcctctgtcc 63
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 569 ggaattcactttgtaggtcaggctggcctcgaactcactgagatctgcctgcctctgtcc 510
Query: 64 ctcgaatgctgggattaaagggggagggggtgagtcactacacttggctcaaacttaata 123
|||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 509 ctcgaatgctgggattaaagggggggggggtgaatcactacacttggctcaaacttaata 450
Query: 124 tctttatcatatagcaaacatcacacttggcagttgaaaaatgtgcttgattttcaactc 183
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 449 tctttatcatatagcaaacatcacacttggcagttgaaaaacgtgcttgattttcaactc 390
Query: 184 ttcattgagcatgtgttacatttgatacatgctgagttacaaagtaatctctccaagtgg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 ttcattgagcatgtgttacatttgatacatgctgagttacaaagtaatctctccaagtgg 330
Query: 244 gaaatgattaaaattatgtagactatattacctgaatctagagagattatcgtaaaaata 303
|||||||||||||| ||||||||||||||| |||||||||| |||||||||
Sbjct: 329 gaaatgattaaaat---------tatattacctgaatcaagagagattaaagtaaaaata 279
Query: 304 aaacaagtatatcca 318
|||||||||||||||
Sbjct: 278 aaacaagtatatcca 264
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 719
Length adjustment: 9
Effective length of query: 310
Effective length of database: 710
Effective search space: 220100
Effective search space used: 220100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no265_c22.g1 MSMg01no265_c22.g1 CHROMAT_FILE:
MSMg01no265_c22.g1 PHD_FILE: MSMg01no265_c22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:02:36 2005
(293 letters)
>mm_chr2_65458794_65459486
Length = 693
Score = 565 bits (292), Expect = e-165
Identities = 292/292 (100%)
Strand = Plus / Plus
Query: 1 tagaaacctgcgttggagactggttatattcaacacgcacatggattctgtgctatgagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tagaaacctgcgttggagactggttatattcaacacgcacatggattctgtgctatgagt 260
Query: 61 accattccctttatttcaggtaagcaagcatgattctatttttgttgcatcagtgaatca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 accattccctttatttcaggtaagcaagcatgattctatttttgttgcatcagtgaatca 320
Query: 121 cgattctgccaaatgatggcatttaaaataagatgtgctttgtaatgttgtatgcagaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cgattctgccaaatgatggcatttaaaataagatgtgctttgtaatgttgtatgcagaac 380
Query: 181 tcaaaggctcaaatgctctaattctggctgttctgcgtttaaaaaccttcctatgctaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcaaaggctcaaatgctctaattctggctgttctgcgtttaaaaaccttcctatgctaaa 440
Query: 241 atgatcactggctgtgccatgttgtattttcaatgttttcttcggcttctta 292
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atgatcactggctgtgccatgttgtattttcaatgttttcttcggcttctta 492
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 693
Length adjustment: 9
Effective length of query: 284
Effective length of database: 684
Effective search space: 194256
Effective search space used: 194256
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
