CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTCAAGTGAGTAATTCTGAATGGCTGAGAAGCACCTAAATAAATGT
TCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTGAGATT
CCACCTCACACCAGTCAGAATGGCTAAGACCAAAAAAAAAAAATCAGGTG
ACAGCAGATGCTGGCGAAGATATGGAGAAAGAGGAACACTCCTCCATTTC
TGGTAAGATTTCAAGCTGGTACAACCCCTCTGGAAATCAGTTTGGCAGTT
TCTCAGAAAATTGTACATAGGACTACCTGAGGACCCAGTAATACCACGCC
TGGGCATATACCCAGAATATGTTCCAACACACCACACCGACACATGCTCC
ACTATGTTCATAGAAGCCCCACCCATAATAACCAGAAGTTGCAAACAACC
CAGATGTCCCACAACAAAGGAATATATACAGAAAATGTGGTACATTTACC
CAATGGAGTACTACTCAGCTATTGAAAACAATGACTTCATGAAATTCTTA
GGCAAATGGATGGGACTAGAAAATATCATCCTGAGTGAGGGGTCTGCAAC
CTTATAAGCAGAACAACAATATGAACTAACCTATTCCCCCAGAGCTCTTG
TCTCTAGCTGCATATATAGCAGAGGATGGCCTAGTTGGCCATCAATGTGA
GGAGAGCCCTTTGTCTTGCAAAGATATATGTCCCAGTAAAGGGGAATGTC
AGTGCCAGTAAG

ACGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXCCATCAAAGTCAGGCTAAATAATC
TGAACTTCTGAAAATCAGTTTCATCATTCCGGTGGTCTCATTTGGCTAAA
TAAAATTTTAGGTTGTATTTAAAAATCAACTTTCACCAAATTTTTCATCT
TTATATCTTTCTGTATTTTTTTATTTGCTTGTTTAAAATGGGCTCCTCTG
GATCAGTGTGGTACATGTGTTTTTGCTTCCTGTCTTTTACATTTGAGTAT
TATTTGCAAACCTGAAGGCTACCTTACATTAGTTTGTAACCCTTTGAGAT
AATTGAGCTTTTCTGTCTTATTTGCCATCATATTCCCAGCATTCTCCTTT
AAATTTCGTCTGTATCTGAACAAATTATTAATAATTCAGTTTGCAACCAT
TTAAGGATAATATGCCACAAGGAAATAGCCCTCCTGCCCCCCCCCCATGT
CCATACGAAAATGCTATCAGTGTTTGTTAATTGGGTTTTCTTGCTTTGCT
TTTGTTTCTGGGTTTTGGTTTTTTGGTTCTTTTCTCTTCTTTTTCTTTTT
TTTTTTTGTTTTTTTGTTTGGTTTGGTTTGTTNTTTTTTTTTTTTNTTTT
TTTTTTTTTNTNNTTTTTTTTTTTNTTTTTTTTTTTTTTTTTTTTTTTNT
TTNNTNTTTTTTTTTTTTTTTTTTNNTTTTTTTTTTCNTTTTTTTTTTTT
TTTTTTTTTTN

Query= MSMg01no265_l16.g1 MSMg01no265_l16.g1 CHROMAT_FILE:
MSMg01no265_l16.g1 PHD_FILE: MSMg01no265_l16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:03:19 2005
         (539 letters)



>mm_chr2_57472852_57473790
          Length = 939

 Score = 1007 bits (521), Expect = 0.0
 Identities = 536/543 (98%), Gaps = 4/543 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   ccatcaaagtcaggctaaataatctgaacttctgaaaatcagtttcatcattccggtggt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 ccatcaaagtcaggctaaataatctgaacttctgaaaatcagtttcatcattccggtggt 633

                                                                       
Query: 61  ctcatttggctaaataaaattttaggttgtatttaaaaatcaactttcaccaaatttttc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 ctcatttggctaaataaaattttaggttgtatttaaaaatcaactttcaccaaatttttc 573

                                                                       
Query: 121 atctttatatctttctgtatttttttatttgcttgtttaaaatgggctcctctggatcag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 atctttatatctttctgtatttttttatttgcttgtttaaaatgggctcctctggatcag 513

                                                                       
Query: 181 tgtggtacatgtgtttttgcttcctgtcttttacatttgagtattatttgcaaacctgaa 240
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 512 tgtggtacatgtgtttttgcttcctgtcttttacattttagtattatttgcaaacctgaa 453

                                                                       
Query: 241 ggctaccttacattagtttgtaaccctttgagataattgagcttttctgtcttatttgcc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 ggctaccttacattagtttgtaaccctttgagataattgagcttttctgtcttatttgcc 393

                                                                       
Query: 301 atcatattcccagcattctcctttaaatttcgtctgtatctgaacaaattattaataatt 360
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 392 atcatattcccagcattctcctttaaatttcgtctgtatctgaagaaattattaataatt 333

                                                                       
Query: 361 cagtttgcaaccatttaaggataatatgccacaaggaaatagccctcctgcccccccccc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 332 cagtttgcaaccatttaaggataatatgccacaaggaaatagccctcctgcccccccgcc 273

                                                                       
Query: 421 atgtccatacgaaaatgctatcagtgtttgttaattgggttttcttgctttgcttttgtt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 atgtccatacgaaaatgctatcagtgtttgttaattgggttttcttgctttgcttttgtt 213

                                                                       
Query: 481 tctgggttttggttttttggttcttttctcttctttttctttttttttttt----gtttt 536
           |||||||||||||||||||||||||||||||||||||||||||||||||||    |||||
Sbjct: 212 tctgggttttggttttttggttcttttctcttctttttcttttttttttttttttgtttt 153

              
Query: 537 ttt 539
           |||
Sbjct: 152 ttt 150


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 539
Length of database: 939
Length adjustment: 10
Effective length of query: 529
Effective length of database: 929
Effective search space:   491441
Effective search space used:   491441
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)